We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEgr2
ModelEGR2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusvdvdRhGKGGGhGKvddnndv
Best auROC (human)0.961
Best auROC (mouse)0.996
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words575
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilyEGR factors {2.3.1.3}
MGIMGI:95296
EntrezGeneGeneID:13654
(SSTAR profile)
UniProt IDEGR2_MOUSE
UniProt ACP08152
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.17071
0.0005 8.18706
0.0001 12.413160000000001
GTEx tissue expression atlas Egr2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0121.08.037.021.032.016.029.019.050.035.076.054.05.06.046.024.0
0218.017.063.010.027.016.018.04.041.033.097.017.09.016.074.019.0
0312.09.053.021.016.010.011.045.041.031.087.093.07.04.018.021.0
0413.07.050.06.010.05.037.02.031.013.0118.07.017.019.0141.03.0
0533.014.06.018.04.016.02.022.082.0137.09.0118.02.06.06.04.0
067.03.0102.09.06.01.0165.01.00.00.023.00.01.01.0159.01.0
070.01.011.02.00.00.01.04.05.06.0151.0287.03.01.06.01.0
082.01.03.02.00.00.08.00.012.00.0154.03.012.00.0278.04.0
090.00.024.02.01.00.00.00.02.03.0417.021.00.00.09.00.0
100.00.03.00.00.02.01.00.07.03.0440.00.02.00.021.00.0
113.00.00.06.01.00.00.04.0105.0194.04.0162.00.00.00.00.0
125.04.095.05.09.05.0170.010.00.01.02.01.01.04.0163.04.0
130.00.010.05.03.01.04.06.029.013.0278.0110.04.02.011.03.0
148.06.017.05.04.03.06.03.091.039.0147.026.013.016.073.022.0
1528.06.070.012.018.014.012.020.031.024.0132.056.06.012.022.016.0
1612.08.049.014.014.07.025.010.041.033.0133.029.08.012.069.015.0
1718.09.033.015.015.018.010.017.074.049.080.073.011.010.035.012.0
1821.018.068.011.014.016.039.017.036.018.087.017.09.014.073.021.0
1918.06.045.011.09.015.018.024.040.037.0139.051.08.09.035.014.0
2016.011.030.018.011.019.028.09.055.057.092.033.06.020.054.020.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.349-1.2850.209-0.3490.066-0.616-0.031-0.4470.5080.1540.9240.584-1.728-1.5580.425-0.218
02-0.5-0.5560.737-1.071-0.102-0.616-0.5-1.9340.3110.0961.167-0.556-1.173-0.6160.897-0.447
03-0.895-1.1730.566-0.349-0.616-1.071-0.980.4030.3110.0341.0581.125-1.412-1.934-0.5-0.349
04-0.818-1.4120.508-1.558-1.071-1.7280.209-2.5420.034-0.8181.362-1.412-0.556-0.4471.54-2.192
050.096-0.746-1.558-0.5-1.934-0.616-2.542-0.3030.9991.511-1.1731.362-2.542-1.558-1.558-1.934
06-1.412-2.1921.217-1.173-1.558-3.0861.696-3.086-4.365-4.365-0.26-4.365-3.086-3.0861.659-3.086
07-4.365-3.086-0.98-2.542-4.365-4.365-3.086-1.934-1.728-1.5581.6082.249-2.192-3.086-1.558-3.086
08-2.542-3.086-2.192-2.542-4.365-4.365-1.285-4.365-0.895-4.3651.628-2.192-0.895-4.3652.217-1.934
09-4.365-4.365-0.218-2.542-3.086-4.365-4.365-4.365-2.542-2.1922.622-0.349-4.365-4.365-1.173-4.365
10-4.365-4.365-2.192-4.365-4.365-2.542-3.086-4.365-1.412-2.1922.676-4.365-2.542-4.365-0.349-4.365
11-2.192-4.365-4.365-1.558-3.086-4.365-4.365-1.9341.2461.858-1.9341.678-4.365-4.365-4.365-4.365
12-1.728-1.9341.146-1.728-1.173-1.7281.726-1.071-4.365-3.086-2.542-3.086-3.086-1.9341.684-1.934
13-4.365-4.365-1.071-1.728-2.192-3.086-1.934-1.558-0.031-0.8182.2171.292-1.934-2.542-0.98-2.192
14-1.285-1.558-0.556-1.728-1.934-2.192-1.558-2.1921.1030.2611.581-0.139-0.818-0.6160.884-0.303
15-0.066-1.5580.842-0.895-0.5-0.746-0.895-0.3970.034-0.2181.4740.62-1.558-0.895-0.303-0.616
16-0.895-1.2850.488-0.746-0.746-1.412-0.178-1.0710.3110.0961.481-0.031-1.285-0.8950.828-0.678
17-0.5-1.1730.096-0.678-0.678-0.5-1.071-0.5560.8970.4880.9750.884-0.98-1.0710.154-0.895
18-0.349-0.50.813-0.98-0.746-0.6160.261-0.5560.182-0.51.058-0.556-1.173-0.7460.884-0.349
19-0.5-1.5580.403-0.98-1.173-0.678-0.5-0.2180.2870.2091.5250.527-1.285-1.1730.154-0.746
20-0.616-0.980.002-0.5-0.98-0.447-0.066-1.1730.6020.6381.1140.096-1.558-0.3970.584-0.397