We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEtv6
ModelETV6_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusndnvdvWGSAAdbn
Best auROC (human)
Best auROC (mouse)0.857
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words506
TF familyEts-related factors {3.5.2}
TF subfamilyETV6-like factors {3.5.2.6}
MGIMGI:109336
EntrezGeneGeneID:14011
(SSTAR profile)
UniProt IDETV6_MOUSE
UniProt ACP97360
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.315010000000001
0.0005 12.521260000000002
0.0001 14.930215
GTEx tissue expression atlas Etv6 expression
Motifs in JASPAR
MA0645.1 (ETV6; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.07.076.029.034.015.023.028.017.027.068.026.024.07.062.026.0
0230.027.039.010.026.014.07.09.053.057.088.031.024.026.043.016.0
0362.023.041.07.053.051.02.018.057.043.057.020.09.010.037.010.0
0491.016.042.032.083.016.02.026.057.010.031.039.021.09.012.013.0
0559.077.0108.08.016.024.07.04.011.035.034.07.012.041.048.09.0
0680.05.04.09.0139.05.010.023.0132.02.025.038.08.02.04.014.0
0715.00.0336.08.00.00.013.01.01.00.041.01.08.00.071.05.0
080.04.019.01.00.00.00.00.035.070.0332.024.02.01.012.00.0
0934.00.03.00.073.00.01.01.0324.07.032.00.025.00.00.00.0
10377.012.037.030.04.01.01.01.028.01.05.02.01.00.00.00.0
11186.024.0156.044.07.00.06.01.015.06.020.02.08.01.020.04.0
1217.0100.021.078.03.017.01.010.010.085.027.080.03.010.031.07.0
138.09.05.011.084.051.018.059.015.016.021.028.053.025.065.032.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.008-1.4540.881-0.0740.083-0.721-0.302-0.108-0.599-0.1440.771-0.181-0.26-1.4540.679-0.181
02-0.04-0.1440.219-1.114-0.181-0.788-1.454-1.2150.5230.5951.027-0.008-0.26-0.1810.316-0.658
030.679-0.3020.269-1.4540.5230.485-2.584-0.5430.5950.3160.595-0.439-1.215-1.1140.167-1.114
041.061-0.6580.2930.0230.969-0.658-2.584-0.1810.595-1.114-0.0080.219-0.392-1.215-0.938-0.86
050.630.8941.231-1.328-0.658-0.26-1.454-1.975-1.0220.1120.083-1.454-0.9380.2690.425-1.215
060.932-1.77-1.975-1.2151.483-1.77-1.114-0.3021.431-2.584-0.220.193-1.328-2.584-1.975-0.788
07-0.721-4.42.364-1.328-4.4-4.4-0.86-3.126-3.126-4.40.269-3.126-1.328-4.40.814-1.77
08-4.4-1.975-0.49-3.126-4.4-4.4-4.4-4.40.1120.82.352-0.26-2.584-3.126-0.938-4.4
090.083-4.4-2.234-4.40.841-4.4-3.126-3.1262.328-1.4540.023-4.4-0.22-4.4-4.4-4.4
102.479-0.9380.167-0.04-1.975-3.126-3.126-3.126-0.108-3.126-1.77-2.584-3.126-4.4-4.4-4.4
111.773-0.261.5980.339-1.454-4.4-1.6-3.126-0.721-1.6-0.439-2.584-1.328-3.126-0.439-1.975
12-0.5991.155-0.3920.907-2.234-0.599-3.126-1.114-1.1140.993-0.1440.932-2.234-1.114-0.008-1.454
13-1.328-1.215-1.77-1.0220.9810.485-0.5430.63-0.721-0.658-0.392-0.1080.523-0.220.7260.023