We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorFoxk1
ModelFOXK1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnbTGTTThYnbn
Best auROC (human)0.86
Best auROC (mouse)0.914
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)4
Aligned words502
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXK {3.3.1.11}
MGIMGI:1347488
EntrezGeneGeneID:17425
(SSTAR profile)
UniProt IDFOXK1_MOUSE
UniProt ACP42128
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.47477
0.0005 13.0097
0.0001 15.446954999999999
GTEx tissue expression atlas Foxk1 expression
Motifs in JASPAR
MA0852.1 (Foxk1; Mus musculus)
MA0852.2 (FOXK1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
019.022.019.014.024.038.024.091.018.049.019.038.03.032.037.063.0
025.00.00.049.08.02.02.0129.04.03.01.091.06.02.05.0193.0
034.00.019.00.01.00.05.01.00.00.08.00.045.05.0412.00.0
040.00.00.050.00.01.00.04.05.03.04.0432.00.00.00.01.0
050.00.00.05.00.00.01.03.00.01.00.03.06.06.012.0463.0
060.00.02.04.00.01.02.04.00.01.00.012.09.07.095.0363.0
071.01.00.07.05.01.00.03.039.015.03.042.0211.084.014.074.0
081.0195.07.053.09.049.05.038.00.03.05.09.07.047.025.047.0
091.04.010.02.0123.046.041.084.011.07.017.07.022.031.060.034.0
1027.027.040.063.09.026.014.039.021.019.017.071.022.015.027.063.0
1140.014.014.011.013.026.019.029.021.023.029.025.026.064.052.094.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.215-0.346-0.49-0.788-0.260.193-0.261.061-0.5430.445-0.490.193-2.2340.0230.1670.695
02-1.77-4.4-4.40.445-1.328-2.584-2.5841.408-1.975-2.234-3.1261.061-1.6-2.584-1.771.81
03-1.975-4.4-0.49-4.4-3.126-4.4-1.77-3.126-4.4-4.4-1.328-4.40.361-1.772.568-4.4
04-4.4-4.4-4.40.465-4.4-3.126-4.4-1.975-1.77-2.234-1.9752.615-4.4-4.4-4.4-3.126
05-4.4-4.4-4.4-1.77-4.4-4.4-3.126-2.234-4.4-3.126-4.4-2.234-1.6-1.6-0.9382.684
06-4.4-4.4-2.584-1.975-4.4-3.126-2.584-1.975-4.4-3.126-4.4-0.938-1.215-1.4541.1042.441
07-3.126-3.126-4.4-1.454-1.77-3.126-4.4-2.2340.219-0.721-2.2340.2931.8990.981-0.7880.855
08-3.1261.821-1.4540.523-1.2150.445-1.770.193-4.4-2.234-1.77-1.215-1.4540.404-0.220.404
09-3.126-1.975-1.114-2.5841.3610.3830.2690.981-1.022-1.454-0.599-1.454-0.346-0.0080.6460.083
10-0.144-0.1440.2440.695-1.215-0.181-0.7880.219-0.392-0.49-0.5990.814-0.346-0.721-0.1440.695
110.244-0.788-0.788-1.022-0.86-0.181-0.49-0.074-0.392-0.302-0.074-0.22-0.1810.7110.5041.093