We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorGata2
ModelGATA2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusnvnnndnnnnnvWGATARvvdn
Best auROC (human)0.966
Best auROC (mouse)0.966
Peak sets in benchmark (human)84
Peak sets in benchmark (mouse)54
Aligned words501
TF familyGATA-type zinc fingers {2.2.1}
TF subfamilyTwo zinc-finger GATA factors {2.2.1.1}
MGIMGI:95662
EntrezGeneGeneID:14461
(SSTAR profile)
UniProt IDGATA2_MOUSE
UniProt ACO09100
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.112760000000002
0.0005 12.07521
0.0001 15.50686
GTEx tissue expression atlas Gata2 expression
Motifs in JASPAR
MA0036.1 (GATA2; Homo sapiens)
MA0036.2 (GATA2; Homo sapiens)
MA0036.3 (GATA2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.022.0105.08.042.024.013.026.081.032.026.020.020.011.049.08.0
0225.025.042.064.028.015.05.041.0118.027.028.020.06.010.032.014.0
0323.014.038.0102.022.018.02.035.053.019.017.018.014.038.066.021.0
0420.09.054.029.028.018.017.026.046.029.029.019.017.034.095.030.0
0523.013.049.026.026.017.09.038.085.022.065.023.011.015.055.023.0
068.019.049.069.018.020.02.027.067.052.030.029.011.030.054.015.0
0719.08.031.046.039.032.08.042.034.037.048.016.010.039.060.031.0
0822.023.038.019.043.032.015.026.039.029.057.022.019.035.059.022.0
0922.042.044.015.045.033.011.030.033.050.053.033.010.024.029.026.0
1021.017.059.013.073.032.010.034.027.035.057.018.018.017.052.017.0
1128.043.058.010.032.036.014.019.027.061.071.019.05.037.035.05.0
1265.06.01.020.099.05.00.073.0132.04.03.039.031.01.02.019.0
130.00.0327.00.00.00.016.00.00.00.06.00.00.00.0151.00.0
140.00.00.00.00.00.00.00.0500.00.00.00.00.00.00.00.0
150.05.00.0495.00.00.00.00.00.00.00.00.00.00.00.00.0
160.00.00.00.05.00.00.00.00.00.00.00.0446.07.03.039.0
17305.026.093.027.05.00.02.00.00.01.02.00.030.00.05.04.0
1865.085.0177.013.05.013.03.06.05.050.036.011.03.03.021.04.0
1925.014.035.04.081.031.020.019.076.054.089.018.04.04.024.02.0
2063.022.057.044.052.022.07.022.070.031.044.023.014.04.018.07.0
2129.023.045.0102.030.024.03.022.037.032.035.022.07.053.020.016.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.86-0.3461.203-1.3280.293-0.26-0.86-0.1810.9450.023-0.181-0.439-0.439-1.0220.445-1.328
02-0.22-0.220.2930.711-0.108-0.721-1.770.2691.32-0.144-0.108-0.439-1.6-1.1140.023-0.788
03-0.302-0.7880.1931.174-0.346-0.543-2.5840.1120.523-0.49-0.599-0.543-0.7880.1930.741-0.392
04-0.439-1.2150.542-0.074-0.108-0.543-0.599-0.1810.383-0.074-0.074-0.49-0.5990.0831.104-0.04
05-0.302-0.860.445-0.181-0.181-0.599-1.2150.1930.993-0.3460.726-0.302-1.022-0.7210.56-0.302
06-1.328-0.490.4450.785-0.543-0.439-2.584-0.1440.7560.504-0.04-0.074-1.022-0.040.542-0.721
07-0.49-1.328-0.0080.3830.2190.023-1.3280.2930.0830.1670.425-0.658-1.1140.2190.646-0.008
08-0.346-0.3020.193-0.490.3160.023-0.721-0.1810.219-0.0740.595-0.346-0.490.1120.63-0.346
09-0.3460.2930.339-0.7210.3610.054-1.022-0.040.0540.4650.5230.054-1.114-0.26-0.074-0.181
10-0.392-0.5990.63-0.860.8410.023-1.1140.083-0.1440.1120.595-0.543-0.543-0.5990.504-0.599
11-0.1080.3160.613-1.1140.0230.14-0.788-0.49-0.1440.6630.814-0.49-1.770.1670.112-1.77
120.726-1.6-3.126-0.4391.145-1.77-4.40.8411.431-1.975-2.2340.219-0.008-3.126-2.584-0.49
13-4.4-4.42.337-4.4-4.4-4.4-0.658-4.4-4.4-4.4-1.6-4.4-4.4-4.41.565-4.4
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.761-4.4-4.4-4.4-4.4-4.4-4.4-4.4
15-4.4-1.77-4.42.751-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
16-4.4-4.4-4.4-4.4-1.77-4.4-4.4-4.4-4.4-4.4-4.4-4.42.647-1.454-2.2340.219
172.267-0.1811.082-0.144-1.77-4.4-2.584-4.4-4.4-3.126-2.584-4.4-0.04-4.4-1.77-1.975
180.7260.9931.724-0.86-1.77-0.86-2.234-1.6-1.770.4650.14-1.022-2.234-2.234-0.392-1.975
19-0.22-0.7880.112-1.9750.945-0.008-0.439-0.490.8810.5421.039-0.543-1.975-1.975-0.26-2.584
200.695-0.3460.5950.3390.504-0.346-1.454-0.3460.8-0.0080.339-0.302-0.788-1.975-0.543-1.454
21-0.074-0.3020.3611.174-0.04-0.26-2.234-0.3460.1670.0230.112-0.346-1.4540.523-0.439-0.658