We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKlf5
ModelKLF5_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusvvvvdGGGYGGGGMndSv
Best auROC (human)0.96
Best auROC (mouse)0.988
Peak sets in benchmark (human)32
Peak sets in benchmark (mouse)23
Aligned words504
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
MGIMGI:1338056
EntrezGeneGeneID:12224
(SSTAR profile)
UniProt IDKLF5_MOUSE
UniProt ACQ9Z0Z7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.01511
0.0005 6.35816
0.0001 11.196010000000001
GTEx tissue expression atlas Klf5 expression
Motifs in JASPAR
MA0599.1 (KLF5; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0119.014.051.07.036.029.040.012.064.050.099.018.06.09.037.07.0
0230.010.070.015.025.022.043.012.037.044.0127.019.05.010.022.07.0
0320.021.042.014.024.023.09.030.063.090.095.014.06.016.027.04.0
0439.01.064.09.049.08.054.039.060.011.034.068.014.01.040.07.0
054.00.0158.00.01.00.020.00.02.02.0187.01.02.01.0120.00.0
060.00.09.00.00.00.03.00.01.00.0481.03.00.00.01.00.0
070.00.01.00.00.00.00.00.02.02.0490.00.00.00.03.00.0
080.00.00.02.00.00.00.02.056.0311.00.0127.00.00.00.00.0
098.00.048.00.013.01.0292.05.00.00.00.00.03.00.0126.02.0
100.00.022.02.00.00.00.01.012.00.0332.0122.00.00.07.00.0
110.00.012.00.00.00.00.00.036.00.0320.05.02.03.0117.03.0
124.01.031.02.00.00.00.03.026.09.0396.018.02.00.06.00.0
135.023.02.02.01.06.02.01.040.0329.034.030.02.014.06.01.0
148.013.025.02.067.0143.074.088.05.025.06.08.08.014.010.02.0
1510.07.053.018.030.029.084.052.012.012.073.018.06.05.066.023.0
167.04.040.07.014.09.020.010.044.037.0173.022.08.024.073.06.0
1713.08.038.014.09.014.027.024.066.074.0139.027.07.07.029.02.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.486-0.7840.489-1.4510.144-0.070.248-0.9340.7150.4691.149-0.539-1.596-1.2110.171-1.451
02-0.036-1.110.804-0.717-0.216-0.3420.32-0.9340.1710.3431.397-0.486-1.766-1.11-0.342-1.451
03-0.435-0.3880.296-0.784-0.256-0.298-1.211-0.0360.6991.0541.108-0.784-1.596-0.654-0.14-1.971
040.223-3.1220.715-1.2110.449-1.3240.5460.2230.65-1.0180.0870.775-0.784-3.1220.248-1.451
05-1.971-4.3971.615-4.397-3.122-4.397-0.435-4.397-2.58-2.581.783-3.122-2.58-3.1221.34-4.397
06-4.397-4.397-1.211-4.397-4.397-4.397-2.23-4.397-3.122-4.3972.726-2.23-4.397-4.397-3.122-4.397
07-4.397-4.397-3.122-4.397-4.397-4.397-4.397-4.397-2.58-2.582.745-4.397-4.397-4.397-2.23-4.397
08-4.397-4.397-4.397-2.58-4.397-4.397-4.397-2.580.5822.291-4.3971.397-4.397-4.397-4.397-4.397
09-1.324-4.3970.429-4.397-0.856-3.1222.228-1.766-4.397-4.397-4.397-4.397-2.23-4.3971.389-2.58
10-4.397-4.397-0.342-2.58-4.397-4.397-4.397-3.122-0.934-4.3972.3561.357-4.397-4.397-1.451-4.397
11-4.397-4.397-0.934-4.397-4.397-4.397-4.397-4.3970.144-4.3972.319-1.766-2.58-2.231.315-2.23
12-1.971-3.122-0.004-2.58-4.397-4.397-4.397-2.23-0.177-1.2112.532-0.539-2.58-4.397-1.596-4.397
13-1.766-0.298-2.58-2.58-3.122-1.596-2.58-3.1220.2482.3470.087-0.036-2.58-0.784-1.596-3.122
14-1.324-0.856-0.216-2.580.761.5150.8591.031-1.766-0.216-1.596-1.324-1.324-0.784-1.11-2.58
15-1.11-1.4510.527-0.539-0.036-0.070.9850.508-0.934-0.9340.845-0.539-1.596-1.7660.745-0.298
16-1.451-1.9710.248-1.451-0.784-1.211-0.435-1.110.3430.1711.705-0.342-1.324-0.2560.845-1.596
17-0.856-1.3240.197-0.784-1.211-0.784-0.14-0.2560.7450.8591.487-0.14-1.451-1.451-0.07-2.58