We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorPrdm14
ModelPRD14_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusndddSKTAGRGMMSbddn
Best auROC (human)0.881
Best auROC (mouse)0.947
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)11
Aligned words535
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
MGIMGI:3588194
EntrezGeneGeneID:383491
(SSTAR profile)
UniProt IDPRD14_MOUSE
UniProt ACE9Q3T6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.47921
0.0005 11.22206
0.0001 14.86916
GTEx tissue expression atlas Prdm14 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0135.08.045.019.0103.019.01.044.033.010.043.021.022.010.040.027.0
0241.013.0125.014.027.09.05.06.037.015.060.017.027.013.055.016.0
0340.06.067.019.029.06.03.012.084.011.064.086.010.01.034.08.0
0410.035.0106.012.06.05.07.06.011.034.0103.020.06.015.0103.01.0
058.00.08.017.015.02.05.067.058.06.089.0166.06.01.03.029.0
069.07.02.069.02.00.00.07.06.02.03.094.01.00.08.0270.0
0718.00.00.00.09.00.00.00.011.00.00.02.0424.04.05.07.0
0832.022.0408.00.03.00.01.00.01.00.04.00.02.01.06.00.0
0930.00.07.01.021.00.01.01.0311.07.085.016.00.00.00.00.0
1010.011.0328.013.00.00.06.01.06.02.084.01.00.00.018.00.0
117.06.01.02.08.01.00.04.0266.0121.022.027.010.02.01.02.0
1246.0202.017.026.032.082.00.016.05.012.03.04.015.017.01.02.0
1312.050.025.011.030.0247.016.020.00.014.03.04.03.018.026.01.0
149.017.012.07.035.0161.012.0121.07.021.025.017.03.013.08.012.0
1510.04.024.016.062.017.08.0125.020.04.017.016.027.013.070.047.0
1616.021.062.020.09.011.04.014.034.020.042.023.022.019.0133.030.0
1726.013.030.012.023.026.05.017.027.0112.062.040.017.028.018.024.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.152-1.2870.401-0.4491.224-0.449-3.0880.3790.094-1.0740.356-0.351-0.306-1.0740.285-0.104
020.309-0.821.417-0.748-0.104-1.175-1.73-1.560.207-0.6810.687-0.558-0.104-0.820.6-0.618
030.285-1.560.796-0.449-0.033-1.56-2.194-0.8971.021-0.9820.7511.045-1.074-3.0880.124-1.287
04-1.0740.1521.253-0.897-1.56-1.73-1.414-1.56-0.9820.1241.224-0.399-1.56-0.6811.224-3.088
05-1.287-4.366-1.287-0.558-0.681-2.544-1.730.7960.653-1.561.0791.7-1.56-3.088-2.194-0.033
06-1.175-1.414-2.5440.826-2.544-4.366-4.366-1.414-1.56-2.544-2.1941.133-3.088-4.366-1.2872.186
07-0.502-4.366-4.366-4.366-1.175-4.366-4.366-4.366-0.982-4.366-4.366-2.5442.637-1.936-1.73-1.414
080.064-0.3062.598-4.366-2.194-4.366-3.088-4.366-3.088-4.366-1.936-4.366-2.544-3.088-1.56-4.366
090.0-4.366-1.414-3.088-0.351-4.366-3.088-3.0882.327-1.4141.033-0.618-4.366-4.366-4.366-4.366
10-1.074-0.9822.38-0.82-4.366-4.366-1.56-3.088-1.56-2.5441.021-3.088-4.366-4.366-0.502-4.366
11-1.414-1.56-3.088-2.544-1.287-3.088-4.366-1.9362.1711.385-0.306-0.104-1.074-2.544-3.088-2.544
120.4231.896-0.558-0.1410.0640.997-4.366-0.618-1.73-0.897-2.194-1.936-0.681-0.558-3.088-2.544
13-0.8970.506-0.18-0.9820.02.097-0.618-0.399-4.366-0.748-2.194-1.936-2.194-0.502-0.141-3.088
14-1.175-0.558-0.897-1.4140.1521.67-0.8971.385-1.414-0.351-0.18-0.558-2.194-0.82-1.287-0.897
15-1.074-1.936-0.22-0.6180.719-0.558-1.2871.417-0.399-1.936-0.558-0.618-0.104-0.820.840.444
16-0.618-0.3510.719-0.399-1.175-0.982-1.936-0.7480.124-0.3990.333-0.262-0.306-0.4491.4790.0
17-0.141-0.820.0-0.897-0.262-0.141-1.73-0.558-0.1041.3080.7190.285-0.558-0.068-0.502-0.22