We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorProp1
ModelPROP1_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusnWAATKAvRTTWn
Best auROC (human)
Best auROC (mouse)0.928
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words501
TF familyPaired-related HD factors {3.1.3}
TF subfamilyPROP {3.1.3.20}
MGIMGI:109330
EntrezGeneGeneID:19127
(SSTAR profile)
UniProt IDPROP1_MOUSE
UniProt ACP97458
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.529515
0.0005 12.408535
0.0001 16.23546
GTEx tissue expression atlas Prop1 expression
Motifs in JASPAR
MA0715.1 (PROP1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.09.07.091.027.06.00.099.014.03.08.058.024.06.05.0127.0
0278.00.02.01.023.00.01.00.020.00.00.00.0343.01.09.022.0
03460.03.01.00.01.00.00.00.012.00.00.00.021.00.02.00.0
0419.033.034.0408.03.00.00.00.00.00.00.03.00.00.00.00.0
050.05.02.015.06.05.04.018.02.07.02.023.035.043.067.0266.0
0611.00.032.00.046.00.014.00.052.00.023.00.0149.00.0173.00.0
07116.042.082.018.00.00.00.00.0113.043.070.016.00.00.00.00.0
08173.06.032.018.075.00.03.07.0111.08.022.011.019.00.06.09.0
094.00.00.0374.00.01.00.013.01.00.00.062.02.00.03.040.0
100.02.00.05.00.00.00.01.00.01.00.02.025.035.00.0429.0
1119.00.02.04.029.00.01.08.00.00.00.00.0324.018.022.073.0
12122.057.0115.078.05.08.01.04.07.02.07.09.024.014.034.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.658-1.215-1.4541.061-0.144-1.6-4.41.145-0.788-2.234-1.3280.613-0.26-1.6-1.771.393
020.907-4.4-2.584-3.126-0.302-4.4-3.126-4.4-0.439-4.4-4.4-4.42.384-3.126-1.215-0.346
032.678-2.234-3.126-4.4-3.126-4.4-4.4-4.4-0.938-4.4-4.4-4.4-0.392-4.4-2.584-4.4
04-0.490.0540.0832.558-2.234-4.4-4.4-4.4-4.4-4.4-4.4-2.234-4.4-4.4-4.4-4.4
05-4.4-1.77-2.584-0.721-1.6-1.77-1.975-0.543-2.584-1.454-2.584-0.3020.1120.3160.7562.131
06-1.022-4.40.023-4.40.383-4.4-0.788-4.40.504-4.4-0.302-4.41.552-4.41.701-4.4
071.3030.2930.957-0.543-4.4-4.4-4.4-4.41.2760.3160.8-0.658-4.4-4.4-4.4-4.4
081.701-1.60.023-0.5430.868-4.4-2.234-1.4541.259-1.328-0.346-1.022-0.49-4.4-1.6-1.215
09-1.975-4.4-4.42.471-4.4-3.126-4.4-0.86-3.126-4.4-4.40.679-2.584-4.4-2.2340.244
10-4.4-2.584-4.4-1.77-4.4-4.4-4.4-3.126-4.4-3.126-4.4-2.584-0.220.112-4.42.608
11-0.49-4.4-2.584-1.975-0.074-4.4-3.126-1.328-4.4-4.4-4.4-4.42.328-0.543-0.3460.841
121.3530.5951.2940.907-1.77-1.328-3.126-1.975-1.454-2.584-1.454-1.215-0.26-0.7880.083-0.86