We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSp1
ModelSP1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length27
Quality
A
Motif rank
0
ConsensusvSSvRRGGGMGGGGvvdRRRSvSRvRv
Best auROC (human)0.999
Best auROC (mouse)0.991
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)11
Aligned words494
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
MGIMGI:98372
EntrezGeneGeneID:20683
(SSTAR profile)
UniProt IDSP1_MOUSE
UniProt ACO89090
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.53794
0.0005 1.7703099999999998
0.0001 6.754760000000001
GTEx tissue expression atlas Sp1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
015.011.045.01.07.012.075.016.021.044.0176.026.06.02.036.010.0
028.014.015.02.013.011.042.03.031.062.0225.014.05.013.030.05.0
0329.06.017.05.038.019.010.033.0134.075.064.039.02.09.03.010.0
0432.021.0147.03.016.013.077.03.027.019.041.07.018.012.055.02.0
0511.02.075.05.02.08.048.07.031.023.0237.029.02.00.012.01.0
0610.04.031.01.02.02.028.01.053.09.0300.010.06.02.034.00.0
078.02.059.02.02.02.09.04.013.06.0362.012.03.03.05.01.0
084.01.017.04.01.00.012.00.06.07.0416.06.01.03.013.02.0
095.07.00.00.01.08.00.02.0131.0318.02.07.03.09.00.00.0
1013.00.0127.00.012.00.0325.05.01.00.01.00.00.00.09.00.0
111.00.022.03.00.00.00.00.07.00.0452.03.01.00.04.00.0
122.00.07.00.00.00.00.00.069.07.0385.017.00.01.04.01.0
139.03.055.04.01.02.05.00.035.011.0340.010.04.00.014.00.0
147.022.016.04.03.05.06.02.0109.0236.047.022.01.08.02.03.0
1526.014.072.08.029.0106.092.044.025.019.014.013.05.014.07.05.0
1615.04.057.09.014.09.0105.025.034.014.0118.019.05.04.046.015.0
1717.07.043.01.06.03.017.05.048.039.0225.014.010.02.052.04.0
1819.08.047.07.05.010.034.02.0100.046.0180.011.04.02.017.01.0
1922.015.089.02.013.07.042.04.041.049.0178.010.01.05.012.03.0
2018.015.039.05.00.016.051.09.034.094.0177.016.00.05.013.01.0
2114.05.025.08.016.023.073.018.057.076.0126.021.03.06.016.06.0
2211.07.064.08.012.011.074.013.033.044.0152.011.06.02.041.04.0
2313.03.040.06.04.03.047.010.034.035.0256.06.05.05.022.04.0
2416.011.028.01.04.05.031.06.099.053.0191.022.05.05.015.01.0
2527.013.080.04.09.013.043.09.053.045.0158.09.02.04.021.03.0
2614.023.047.07.07.016.040.012.053.086.0146.017.00.09.06.010.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.756-1.0080.375-3.113-1.441-0.9240.882-0.644-0.3780.3531.732-0.168-1.586-2.570.154-1.1
02-1.314-0.774-0.707-2.57-0.846-1.0080.306-2.220.0060.6931.977-0.774-1.756-0.846-0.026-1.756
03-0.06-1.586-0.585-1.7560.207-0.476-1.10.0681.460.8820.7250.233-2.57-1.201-2.22-1.1
040.037-0.3781.553-2.22-0.644-0.8460.908-2.22-0.13-0.4760.283-1.441-0.529-0.9240.574-2.57
05-1.008-2.570.882-1.756-2.57-1.3140.439-1.4410.006-0.2882.029-0.06-2.57-4.388-0.924-3.113
06-1.1-1.9620.006-3.113-2.57-2.57-0.094-3.1130.537-1.2012.265-1.1-1.586-2.570.097-4.388
07-1.314-2.570.644-2.57-2.57-2.57-1.201-1.962-0.846-1.5862.452-0.924-2.22-2.22-1.756-3.113
08-1.962-3.113-0.585-1.962-3.113-4.388-0.924-4.388-1.586-1.4412.591-1.586-3.113-2.22-0.846-2.57
09-1.756-1.441-4.388-4.388-3.113-1.314-4.388-2.571.4382.323-2.57-1.441-2.22-1.201-4.388-4.388
10-0.846-4.3881.407-4.388-0.924-4.3882.345-1.756-3.113-4.388-3.113-4.388-4.388-4.388-1.201-4.388
11-3.113-4.388-0.332-2.22-4.388-4.388-4.388-4.388-1.441-4.3882.674-2.22-3.113-4.388-1.962-4.388
12-2.57-4.388-1.441-4.388-4.388-4.388-4.388-4.3880.799-1.4412.514-0.585-4.388-3.113-1.962-3.113
13-1.201-2.220.574-1.962-3.113-2.57-1.756-4.3880.126-1.0082.39-1.1-1.962-4.388-0.774-4.388
14-1.441-0.332-0.644-1.962-2.22-1.756-1.586-2.571.2542.0250.418-0.332-3.113-1.314-2.57-2.22
15-0.168-0.7740.842-1.314-0.061.2271.0860.353-0.206-0.476-0.774-0.846-1.756-0.774-1.441-1.756
16-0.707-1.9620.609-1.201-0.774-1.2011.217-0.2060.097-0.7741.334-0.476-1.756-1.9620.397-0.707
17-0.585-1.4410.33-3.113-1.586-2.22-0.585-1.7560.4390.2331.977-0.774-1.1-2.570.518-1.962
18-0.476-1.3140.418-1.441-1.756-1.10.097-2.571.1690.3971.755-1.008-1.962-2.57-0.585-3.113
19-0.332-0.7071.053-2.57-0.846-1.4410.306-1.9620.2830.4591.744-1.1-3.113-1.756-0.924-2.22
20-0.529-0.7070.233-1.756-4.388-0.6440.499-1.2010.0971.1071.738-0.644-4.388-1.756-0.846-3.113
21-0.774-1.756-0.206-1.314-0.644-0.2880.855-0.5290.6090.8951.399-0.378-2.22-1.586-0.644-1.586
22-1.008-1.4410.725-1.314-0.924-1.0080.869-0.8460.0680.3531.586-1.008-1.586-2.570.283-1.962
23-0.846-2.220.258-1.586-1.962-2.220.418-1.10.0970.1262.106-1.586-1.756-1.756-0.332-1.962
24-0.644-1.008-0.094-3.113-1.962-1.7560.006-1.5861.1590.5371.814-0.332-1.756-1.756-0.707-3.113
25-0.13-0.8460.946-1.962-1.201-0.8460.33-1.2010.5370.3751.625-1.201-2.57-1.962-0.378-2.22
26-0.774-0.2880.418-1.441-1.441-0.6440.258-0.9240.5371.0181.546-0.585-4.388-1.201-1.586-1.1