We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorStat5a
ModelSTA5A_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusndnTTCYMRGAAn
Best auROC (human)0.927
Best auROC (mouse)0.993
Peak sets in benchmark (human)24
Peak sets in benchmark (mouse)127
Aligned words500
TF familySTAT factors {6.2.1}
TF subfamilySTAT5A {6.2.1.0.5}
MGIMGI:103036
EntrezGeneGeneID:20850
(SSTAR profile)
UniProt IDSTA5A_MOUSE
UniProt ACP42230
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.643915
0.0005 11.84977
0.0001 15.427790000000002
GTEx tissue expression atlas Stat5a expression
Motifs in JASPAR
MA0519.1 (Stat5a::Stat5b; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.011.024.017.094.031.018.041.050.023.033.031.029.022.032.012.0
0249.022.061.073.014.023.09.041.022.027.018.040.016.030.011.044.0
031.03.00.097.00.03.05.094.01.012.02.084.00.04.01.0193.0
041.01.00.00.01.04.00.017.00.00.01.07.024.06.07.0431.0
051.022.02.01.00.011.00.00.01.07.00.00.06.0447.00.02.0
061.05.00.02.012.0213.020.0242.01.00.01.00.00.01.00.02.0
075.09.00.00.0137.079.03.00.010.011.00.00.0101.0145.00.00.0
0892.08.0151.02.0156.013.044.031.01.00.00.02.00.00.00.00.0
091.04.0244.00.00.00.019.02.03.03.0186.03.00.01.033.01.0
103.00.01.00.04.01.01.02.0430.021.09.022.03.01.02.00.0
11415.03.018.04.07.01.09.06.08.03.01.01.020.00.01.03.0
12173.099.097.081.01.02.03.01.04.05.014.06.02.03.07.02.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.023-1.022-0.26-0.5991.093-0.008-0.5430.2690.465-0.3020.054-0.008-0.074-0.3460.023-0.938
020.445-0.3460.6630.841-0.788-0.302-1.2150.269-0.346-0.144-0.5430.244-0.658-0.04-1.0220.339
03-3.126-2.234-4.41.124-4.4-2.234-1.771.093-3.126-0.938-2.5840.981-4.4-1.975-3.1261.81
04-3.126-3.126-4.4-4.4-3.126-1.975-4.4-0.599-4.4-4.4-3.126-1.454-0.26-1.6-1.4542.613
05-3.126-0.346-2.584-3.126-4.4-1.022-4.4-4.4-3.126-1.454-4.4-4.4-1.62.649-4.4-2.584
06-3.126-1.77-4.4-2.584-0.9381.909-0.4392.036-3.126-4.4-3.126-4.4-4.4-3.126-4.4-2.584
07-1.77-1.215-4.4-4.41.4680.92-2.234-4.4-1.114-1.022-4.4-4.41.1651.525-4.4-4.4
081.072-1.3281.565-2.5841.598-0.860.339-0.008-3.126-4.4-4.4-2.584-4.4-4.4-4.4-4.4
09-3.126-1.9752.044-4.4-4.4-4.4-0.49-2.584-2.234-2.2341.773-2.234-4.4-3.1260.054-3.126
10-2.234-4.4-3.126-4.4-1.975-3.126-3.126-2.5842.61-0.392-1.215-0.346-2.234-3.126-2.584-4.4
112.575-2.234-0.543-1.975-1.454-3.126-1.215-1.6-1.328-2.234-3.126-3.126-0.439-4.4-3.126-2.234
121.7011.1451.1240.945-3.126-2.584-2.234-3.126-1.975-1.77-0.788-1.6-2.584-2.234-1.454-2.584