We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTbx21
ModelTBX21_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnbnddddSTGWSRvdn
Best auROC (human)0.71
Best auROC (mouse)0.877
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)17
Aligned words488
TF familyTBrain-related factors {6.5.2}
TF subfamilyTBX21 (T-bet) {6.5.2.0.3}
MGIMGI:1888984
EntrezGeneGeneID:57765
(SSTAR profile)
UniProt IDTBX21_MOUSE
UniProt ACQ9JKD8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.86441
0.0005 12.116060000000001
0.0001 14.551010000000002
GTEx tissue expression atlas Tbx21 expression
Motifs in JASPAR
MA0690.1 (TBX21; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0121.038.066.09.022.021.024.019.010.041.071.035.08.031.058.014.0
0210.015.031.05.065.020.011.035.056.036.052.075.014.023.020.020.0
0317.021.094.013.029.019.010.036.019.015.061.019.012.010.096.017.0
0421.013.031.012.017.06.015.027.068.031.0110.052.06.021.039.019.0
0554.018.026.014.038.06.06.021.0110.018.022.045.035.05.047.023.0
0669.010.0124.034.010.06.020.011.09.06.059.027.016.08.070.09.0
0717.014.073.00.07.013.07.03.038.068.0163.04.02.013.061.05.0
081.00.01.062.04.00.00.0104.01.03.01.0299.00.00.00.012.0
090.00.06.00.00.01.02.00.00.01.01.00.00.06.0471.00.0
100.00.00.00.03.00.02.03.0134.020.040.0286.00.00.00.00.0
1111.034.077.015.01.04.08.07.01.02.037.02.01.036.0228.024.0
1210.01.02.01.057.01.03.015.0180.04.0108.058.023.01.012.012.0
13114.040.090.026.02.02.01.02.013.021.045.046.011.023.046.06.0
1467.024.022.027.043.02.05.036.058.018.035.071.07.08.011.054.0
1566.023.054.032.017.010.03.022.017.017.017.022.026.027.065.070.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.3680.2170.765-1.191-0.322-0.368-0.236-0.466-1.090.2930.8380.136-1.3040.0160.637-0.764
02-1.09-0.6970.016-1.7460.75-0.415-0.9980.1360.6020.1640.5280.892-0.764-0.278-0.415-0.415
03-0.575-0.3681.117-0.836-0.05-0.466-1.090.164-0.466-0.6970.687-0.466-0.914-1.091.138-0.575
04-0.368-0.8360.016-0.914-0.575-1.576-0.697-0.120.7950.0161.2740.528-1.576-0.3680.243-0.466
050.566-0.519-0.157-0.7640.217-1.576-1.576-0.3681.274-0.519-0.3220.3850.136-1.7460.428-0.278
060.809-1.091.3930.107-1.09-1.576-0.415-0.998-1.191-1.5760.654-0.12-0.634-1.3040.824-1.191
07-0.575-0.7640.865-4.38-1.431-0.836-1.431-2.210.2170.7951.666-1.952-2.56-0.8360.687-1.746
08-3.103-4.38-3.1030.703-1.952-4.38-4.381.218-3.103-2.21-3.1032.271-4.38-4.38-4.38-0.914
09-4.38-4.38-1.576-4.38-4.38-3.103-2.56-4.38-4.38-3.103-3.103-4.38-4.38-1.5762.725-4.38
10-4.38-4.38-4.38-4.38-2.21-4.38-2.56-2.211.47-0.4150.2682.227-4.38-4.38-4.38-4.38
11-0.9980.1070.918-0.697-3.103-1.952-1.304-1.431-3.103-2.560.191-2.56-3.1030.1642.001-0.236
12-1.09-3.103-2.56-3.1030.619-3.103-2.21-0.6971.765-1.9521.2550.637-0.278-3.103-0.914-0.914
131.3090.2681.074-0.157-2.56-2.56-3.103-2.56-0.836-0.3680.3850.407-0.998-0.2780.407-1.576
140.78-0.236-0.322-0.120.34-2.56-1.7460.1640.637-0.5190.1360.838-1.431-1.304-0.9980.566
150.765-0.2780.5660.047-0.575-1.09-2.21-0.322-0.575-0.575-0.575-0.322-0.157-0.120.750.824