We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRela
ModelTF65_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
A
Motif rank
0
ConsensusndGGRMWKYCChvdvYbdbnhhMn
Best auROC (human)0.951
Best auROC (mouse)0.953
Peak sets in benchmark (human)188
Peak sets in benchmark (mouse)99
Aligned words498
TF familyNF-kappaB-related factors {6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors {6.1.1.2}
MGIMGI:103290
EntrezGeneGeneID:19697
(SSTAR profile)
UniProt IDTF65_MOUSE
UniProt ACQ04207
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.94181
0.0005 11.75561
0.0001 15.56936
GTEx tissue expression atlas Rela expression
Motifs in JASPAR
MA0107.1 (RELA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.05.082.017.023.017.023.061.012.011.069.019.011.018.096.020.0
0212.01.044.03.014.01.027.09.011.01.0256.02.010.05.0101.01.0
0321.00.024.02.03.00.03.02.020.00.0374.034.02.01.012.00.0
0440.01.03.02.01.00.00.00.0265.016.0118.014.025.01.09.03.0
05219.074.031.07.010.07.00.01.078.023.014.015.06.01.04.08.0
06164.09.024.0116.016.04.01.084.012.01.00.036.03.02.01.025.0
0722.039.043.091.00.01.00.015.03.01.02.020.010.019.019.0213.0
083.017.01.014.00.022.01.037.01.023.05.035.06.099.020.0214.0
092.07.01.00.018.0143.00.00.02.024.00.01.013.0272.02.013.0
101.033.00.01.09.0417.00.020.00.02.00.01.01.08.00.05.0
115.05.00.01.0201.0170.012.077.00.00.00.00.014.07.02.04.0
1239.041.0117.023.083.036.024.039.02.05.06.01.018.015.037.012.0
1346.06.055.035.041.09.015.032.065.022.065.032.015.08.019.033.0
1472.023.063.09.016.016.08.05.051.038.056.09.027.032.051.022.0
1512.014.013.0127.016.014.06.073.028.031.016.0103.02.08.04.031.0
167.014.022.015.014.013.011.029.011.09.09.010.015.016.0104.0199.0
1718.06.013.010.016.04.09.023.044.020.024.058.049.020.0113.071.0
1821.060.027.019.05.020.01.024.026.081.029.023.016.087.035.024.0
1910.019.032.07.0102.058.018.070.011.026.036.019.012.015.052.011.0
2037.043.023.032.038.042.08.030.042.052.07.037.08.044.021.034.0
2157.059.06.03.0106.050.05.020.021.017.06.015.047.056.014.016.0
22165.017.038.011.0118.042.03.019.06.09.09.07.019.09.016.010.0
2336.080.091.0101.019.022.07.029.014.016.015.021.011.010.013.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.784-1.7660.961-0.595-0.298-0.595-0.2980.667-0.934-1.0180.789-0.486-1.018-0.5391.118-0.435
02-0.934-3.1220.343-2.23-0.784-3.122-0.14-1.211-1.018-3.1222.096-2.58-1.11-1.7661.169-3.122
03-0.388-4.397-0.256-2.58-2.23-4.397-2.23-2.58-0.435-4.3972.4750.087-2.58-3.122-0.934-4.397
040.248-3.122-2.23-2.58-3.122-4.397-4.397-4.3972.131-0.6541.324-0.784-0.216-3.122-1.211-2.23
051.940.859-0.004-1.451-1.11-1.451-4.397-3.1220.911-0.298-0.784-0.717-1.596-3.122-1.971-1.324
061.652-1.211-0.2561.307-0.654-1.971-3.1220.985-0.934-3.122-4.3970.144-2.23-2.58-3.122-0.216
07-0.3420.2230.321.065-4.397-3.122-4.397-0.717-2.23-3.122-2.58-0.435-1.11-0.486-0.4861.913
08-2.23-0.595-3.122-0.784-4.397-0.342-3.1220.171-3.122-0.298-1.7660.116-1.5961.149-0.4351.917
09-2.58-1.451-3.122-4.397-0.5391.515-4.397-4.397-2.58-0.256-4.397-3.122-0.8562.157-2.58-0.856
10-3.1220.058-4.397-3.122-1.2112.584-4.397-0.435-4.397-2.58-4.397-3.122-3.122-1.324-4.397-1.766
11-1.766-1.766-4.397-3.1221.8551.688-0.9340.898-4.397-4.397-4.397-4.397-0.784-1.451-2.58-1.971
120.2230.2731.315-0.2980.9730.144-0.2560.223-2.58-1.766-1.596-3.122-0.539-0.7170.171-0.934
130.387-1.5960.5640.1160.273-1.211-0.7170.0270.73-0.3420.730.027-0.717-1.324-0.4860.058
140.832-0.2980.699-1.211-0.654-0.654-1.324-1.7660.4890.1970.582-1.211-0.140.0270.489-0.342
15-0.934-0.784-0.8561.397-0.654-0.784-1.5960.845-0.104-0.004-0.6541.188-2.58-1.324-1.971-0.004
16-1.451-0.784-0.342-0.717-0.784-0.856-1.018-0.07-1.018-1.211-1.211-1.11-0.717-0.6541.1981.845
17-0.539-1.596-0.856-1.11-0.654-1.971-1.211-0.2980.343-0.435-0.2560.6170.449-0.4351.280.818
18-0.3880.65-0.14-0.486-1.766-0.435-3.122-0.256-0.1770.949-0.07-0.298-0.6541.020.116-0.256
19-1.11-0.4860.027-1.4511.1780.617-0.5390.804-1.018-0.1770.144-0.486-0.934-0.7170.508-1.018
200.1710.32-0.2980.0270.1970.296-1.324-0.0360.2960.508-1.4510.171-1.3240.343-0.3880.087
210.5990.634-1.596-2.231.2170.469-1.766-0.435-0.388-0.595-1.596-0.7170.4080.582-0.784-0.654
221.658-0.5950.197-1.0181.3240.296-2.23-0.486-1.596-1.211-1.211-1.451-0.486-1.211-0.654-1.11
230.1440.9361.0651.169-0.486-0.342-1.451-0.07-0.784-0.654-0.717-0.388-1.018-1.11-0.856-0.856