We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZkscan1
ModelZKSC1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusndvhdbhCCTACTRWGTGYhn
Best auROC (human)
Best auROC (mouse)0.969
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)6
Aligned words476
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF24-like factors {2.3.3.10}
MGIMGI:1921820
EntrezGeneGeneID:74570
(SSTAR profile)
UniProt IDZKSC1_MOUSE
UniProt ACQ8BGS3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.91571
0.0005 6.26596
0.0001 11.32761
GTEx tissue expression atlas Zkscan1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0135.011.019.038.035.014.06.087.026.011.016.032.029.017.027.050.0
0255.015.045.010.018.012.011.012.014.08.030.016.022.017.0159.09.0
0369.08.015.017.020.014.02.016.0103.060.013.069.011.06.014.016.0
0446.015.0130.012.035.08.014.031.020.04.015.05.035.010.063.010.0
0520.025.073.018.07.012.08.010.016.078.074.054.011.05.039.03.0
0615.011.017.011.082.015.08.015.069.058.026.041.033.018.024.010.0
072.0195.01.01.00.0100.01.01.02.072.00.01.01.074.01.01.0
080.04.01.00.025.0389.03.024.00.03.00.00.00.04.00.00.0
090.020.00.05.00.041.01.0358.00.02.00.02.00.04.019.01.0
100.00.00.00.062.00.03.02.020.00.00.00.0355.03.06.02.0
114.0420.010.03.00.02.00.01.02.04.03.00.00.02.02.00.0
120.00.00.06.04.01.00.0423.02.06.00.07.01.00.00.03.0
131.01.04.01.06.00.01.00.00.00.00.00.0173.06.0257.03.0
1444.09.08.0119.02.01.02.02.05.013.026.0218.00.00.02.02.0
152.04.044.01.00.02.020.01.01.04.031.02.00.03.0337.01.0
162.01.00.00.01.02.00.010.06.057.021.0348.00.03.02.00.0
170.03.06.00.011.08.028.016.02.06.013.02.015.010.0322.011.0
184.018.04.02.05.011.04.07.031.0272.019.047.03.016.05.05.0
1910.016.08.09.081.0109.09.0118.07.015.05.05.05.027.015.014.0
2024.024.041.014.085.027.09.046.07.016.08.06.040.035.042.029.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.209-0.925-0.3920.2910.209-0.691-1.5031.114-0.084-0.925-0.5610.1210.024-0.501-0.0470.563
020.658-0.6240.458-1.017-0.445-0.84-0.925-0.84-0.691-1.2310.057-0.561-0.248-0.5011.715-1.118
030.883-1.231-0.624-0.501-0.342-0.691-2.489-0.5611.2820.744-0.7630.883-0.925-1.503-0.691-0.561
040.48-0.6241.514-0.840.209-1.231-0.6910.09-0.342-1.879-0.624-1.6740.209-1.0170.792-1.017
05-0.342-0.1230.939-0.445-1.358-0.84-1.231-1.017-0.5611.0050.9530.639-0.925-1.6740.317-2.138
06-0.624-0.925-0.501-0.9251.055-0.624-1.231-0.6240.8830.71-0.0840.3660.151-0.445-0.163-1.017
07-2.4891.918-3.033-3.033-4.3181.252-3.033-3.033-2.4890.925-4.318-3.033-3.0330.953-3.033-3.033
08-4.318-1.879-3.033-4.318-0.1232.608-2.138-0.163-4.318-2.138-4.318-4.318-4.318-1.879-4.318-4.318
09-4.318-0.342-4.318-1.674-4.3180.366-3.0332.525-4.318-2.489-4.318-2.489-4.318-1.879-0.392-3.033
10-4.318-4.318-4.318-4.3180.777-4.318-2.138-2.489-0.342-4.318-4.318-4.3182.516-2.138-1.503-2.489
11-1.8792.684-1.017-2.138-4.318-2.489-4.318-3.033-2.489-1.879-2.138-4.318-4.318-2.489-2.489-4.318
12-4.318-4.318-4.318-1.503-1.879-3.033-4.3182.692-2.489-1.503-4.318-1.358-3.033-4.318-4.318-2.138
13-3.033-3.033-1.879-3.033-1.503-4.318-3.033-4.318-4.318-4.318-4.318-4.3181.799-1.5032.194-2.138
140.436-1.118-1.2311.426-2.489-3.033-2.489-2.489-1.674-0.763-0.0842.03-4.318-4.318-2.489-2.489
15-2.489-1.8790.436-3.033-4.318-2.489-0.342-3.033-3.033-1.8790.09-2.489-4.318-2.1382.465-3.033
16-2.489-3.033-4.318-4.318-3.033-2.489-4.318-1.017-1.5030.693-0.2942.497-4.318-2.138-2.489-4.318
17-4.318-2.138-1.503-4.318-0.925-1.231-0.011-0.561-2.489-1.503-0.763-2.489-0.624-1.0172.419-0.925
18-1.879-0.445-1.879-2.489-1.674-0.925-1.879-1.3580.092.25-0.3920.502-2.138-0.561-1.674-1.674
19-1.017-0.561-1.231-1.1181.0421.338-1.1181.417-1.358-0.624-1.674-1.674-1.674-0.047-0.624-0.691
20-0.163-0.1630.366-0.6911.09-0.047-1.1180.48-1.358-0.561-1.231-1.5030.3420.2090.390.024