We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF394
(GeneCards)
ModelZN394_HUMAN.H11MO.1.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
D
Motif rank
1
ConsensusdAMWGGARd
Best auROC (human)0.661
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words382
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:18832
EntrezGeneGeneID:84124
(SSTAR profile)
UniProt IDZN394_HUMAN
UniProt ACQ53GI3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.82968
0.0005 6.691224999999999
0.0001 8.098125
GTEx tissue expression atlas ZNF394 expression
ReMap ChIP-seq dataset list ZNF394 datasets
Motifs in JASPAR
PCM
ACGT
0179.034.0202.064.0
02299.010.069.01.0
03261.090.024.04.0
04155.02.018.0204.0
056.00.0373.00.0
0611.013.0347.08.0
07351.012.011.05.0
08289.013.068.09.0
09107.013.070.0189.0
PWM
ACGT
01-0.179-0.9980.749-0.385
021.139-2.126-0.311-3.657
031.003-0.051-1.329-2.865
040.486-3.318-1.5970.759
05-2.554-4.1721.359-4.172
06-2.042-1.8941.287-2.317
071.298-1.965-2.042-2.697
081.105-1.894-0.326-2.217
090.12-1.894-0.2970.683