Transcription factor | BATF (GeneCards) | ||||||||
Model | BATF_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 20 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndbThYhddWWTGASTMWbn | ||||||||
Best auROC (human) | 0.984 | ||||||||
Best auROC (mouse) | 0.969 | ||||||||
Peak sets in benchmark (human) | 10 | ||||||||
Peak sets in benchmark (mouse) | 20 | ||||||||
Aligned words | 501 | ||||||||
TF family | B-ATF-related factors {1.1.4} | ||||||||
TF subfamily | B-ATF {1.1.4.0.1} | ||||||||
HGNC | HGNC:958 | ||||||||
EntrezGene | GeneID:10538 (SSTAR profile) | ||||||||
UniProt ID | BATF_HUMAN | ||||||||
UniProt AC | Q16520 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | BATF expression | ||||||||
ReMap ChIP-seq dataset list | BATF datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 71.0 | 13.0 | 36.0 | 9.0 | 58.0 | 8.0 | 8.0 | 28.0 | 51.0 | 14.0 | 25.0 | 14.0 | 48.0 | 11.0 | 68.0 | 38.0 |
02 | 29.0 | 72.0 | 103.0 | 24.0 | 11.0 | 19.0 | 8.0 | 8.0 | 12.0 | 50.0 | 59.0 | 16.0 | 2.0 | 34.0 | 33.0 | 20.0 |
03 | 1.0 | 6.0 | 21.0 | 26.0 | 4.0 | 4.0 | 0.0 | 167.0 | 7.0 | 4.0 | 31.0 | 161.0 | 2.0 | 1.0 | 5.0 | 60.0 |
04 | 6.0 | 3.0 | 4.0 | 1.0 | 5.0 | 5.0 | 0.0 | 5.0 | 10.0 | 26.0 | 7.0 | 14.0 | 50.0 | 152.0 | 21.0 | 191.0 |
05 | 12.0 | 30.0 | 5.0 | 24.0 | 32.0 | 43.0 | 7.0 | 104.0 | 6.0 | 15.0 | 3.0 | 8.0 | 12.0 | 47.0 | 10.0 | 142.0 |
06 | 13.0 | 23.0 | 10.0 | 16.0 | 52.0 | 28.0 | 5.0 | 50.0 | 3.0 | 8.0 | 4.0 | 10.0 | 29.0 | 167.0 | 40.0 | 42.0 |
07 | 7.0 | 9.0 | 73.0 | 8.0 | 102.0 | 36.0 | 47.0 | 41.0 | 12.0 | 5.0 | 34.0 | 8.0 | 11.0 | 8.0 | 90.0 | 9.0 |
08 | 30.0 | 24.0 | 41.0 | 37.0 | 31.0 | 10.0 | 0.0 | 17.0 | 120.0 | 16.0 | 32.0 | 76.0 | 19.0 | 2.0 | 23.0 | 22.0 |
09 | 97.0 | 2.0 | 31.0 | 70.0 | 10.0 | 2.0 | 1.0 | 39.0 | 38.0 | 3.0 | 17.0 | 38.0 | 19.0 | 2.0 | 4.0 | 127.0 |
10 | 154.0 | 2.0 | 2.0 | 6.0 | 5.0 | 1.0 | 0.0 | 3.0 | 42.0 | 1.0 | 2.0 | 8.0 | 124.0 | 48.0 | 5.0 | 97.0 |
11 | 0.0 | 0.0 | 0.0 | 325.0 | 0.0 | 0.0 | 0.0 | 52.0 | 0.0 | 0.0 | 0.0 | 9.0 | 1.0 | 0.0 | 0.0 | 113.0 |
12 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 12.0 | 433.0 | 52.0 |
13 | 2.0 | 0.0 | 0.0 | 0.0 | 11.0 | 0.0 | 1.0 | 0.0 | 428.0 | 0.0 | 0.0 | 6.0 | 48.0 | 0.0 | 4.0 | 0.0 |
14 | 23.0 | 294.0 | 164.0 | 8.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 2.0 | 0.0 | 0.0 | 1.0 | 5.0 | 0.0 |
15 | 0.0 | 0.0 | 1.0 | 22.0 | 11.0 | 1.0 | 2.0 | 284.0 | 3.0 | 5.0 | 0.0 | 163.0 | 2.0 | 1.0 | 0.0 | 5.0 |
16 | 6.0 | 10.0 | 0.0 | 0.0 | 2.0 | 4.0 | 0.0 | 1.0 | 0.0 | 2.0 | 0.0 | 1.0 | 87.0 | 286.0 | 79.0 | 22.0 |
17 | 64.0 | 2.0 | 12.0 | 17.0 | 275.0 | 6.0 | 5.0 | 16.0 | 16.0 | 2.0 | 25.0 | 36.0 | 4.0 | 0.0 | 14.0 | 6.0 |
18 | 42.0 | 67.0 | 132.0 | 118.0 | 1.0 | 1.0 | 2.0 | 6.0 | 9.0 | 12.0 | 14.0 | 21.0 | 11.0 | 14.0 | 29.0 | 21.0 |
19 | 22.0 | 16.0 | 17.0 | 8.0 | 29.0 | 24.0 | 4.0 | 37.0 | 35.0 | 80.0 | 18.0 | 44.0 | 28.0 | 66.0 | 33.0 | 39.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.814 | -0.86 | 0.14 | -1.215 | 0.613 | -1.328 | -1.328 | -0.108 | 0.485 | -0.788 | -0.22 | -0.788 | 0.425 | -1.022 | 0.771 | 0.193 |
02 | -0.074 | 0.828 | 1.184 | -0.26 | -1.022 | -0.49 | -1.328 | -1.328 | -0.938 | 0.465 | 0.63 | -0.658 | -2.584 | 0.083 | 0.054 | -0.439 |
03 | -3.126 | -1.6 | -0.392 | -0.181 | -1.975 | -1.975 | -4.4 | 1.666 | -1.454 | -1.975 | -0.008 | 1.629 | -2.584 | -3.126 | -1.77 | 0.646 |
04 | -1.6 | -2.234 | -1.975 | -3.126 | -1.77 | -1.77 | -4.4 | -1.77 | -1.114 | -0.181 | -1.454 | -0.788 | 0.465 | 1.572 | -0.392 | 1.8 |
05 | -0.938 | -0.04 | -1.77 | -0.26 | 0.023 | 0.316 | -1.454 | 1.194 | -1.6 | -0.721 | -2.234 | -1.328 | -0.938 | 0.404 | -1.114 | 1.504 |
06 | -0.86 | -0.302 | -1.114 | -0.658 | 0.504 | -0.108 | -1.77 | 0.465 | -2.234 | -1.328 | -1.975 | -1.114 | -0.074 | 1.666 | 0.244 | 0.293 |
07 | -1.454 | -1.215 | 0.841 | -1.328 | 1.174 | 0.14 | 0.404 | 0.269 | -0.938 | -1.77 | 0.083 | -1.328 | -1.022 | -1.328 | 1.05 | -1.215 |
08 | -0.04 | -0.26 | 0.269 | 0.167 | -0.008 | -1.114 | -4.4 | -0.599 | 1.336 | -0.658 | 0.023 | 0.881 | -0.49 | -2.584 | -0.302 | -0.346 |
09 | 1.124 | -2.584 | -0.008 | 0.8 | -1.114 | -2.584 | -3.126 | 0.219 | 0.193 | -2.234 | -0.599 | 0.193 | -0.49 | -2.584 | -1.975 | 1.393 |
10 | 1.585 | -2.584 | -2.584 | -1.6 | -1.77 | -3.126 | -4.4 | -2.234 | 0.293 | -3.126 | -2.584 | -1.328 | 1.369 | 0.425 | -1.77 | 1.124 |
11 | -4.4 | -4.4 | -4.4 | 2.331 | -4.4 | -4.4 | -4.4 | 0.504 | -4.4 | -4.4 | -4.4 | -1.215 | -3.126 | -4.4 | -4.4 | 1.276 |
12 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.584 | -0.938 | 2.617 | 0.504 |
13 | -2.584 | -4.4 | -4.4 | -4.4 | -1.022 | -4.4 | -3.126 | -4.4 | 2.606 | -4.4 | -4.4 | -1.6 | 0.425 | -4.4 | -1.975 | -4.4 |
14 | -0.302 | 2.231 | 1.648 | -1.328 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.234 | -2.584 | -4.4 | -4.4 | -3.126 | -1.77 | -4.4 |
15 | -4.4 | -4.4 | -3.126 | -0.346 | -1.022 | -3.126 | -2.584 | 2.196 | -2.234 | -1.77 | -4.4 | 1.642 | -2.584 | -3.126 | -4.4 | -1.77 |
16 | -1.6 | -1.114 | -4.4 | -4.4 | -2.584 | -1.975 | -4.4 | -3.126 | -4.4 | -2.584 | -4.4 | -3.126 | 1.016 | 2.203 | 0.92 | -0.346 |
17 | 0.711 | -2.584 | -0.938 | -0.599 | 2.164 | -1.6 | -1.77 | -0.658 | -0.658 | -2.584 | -0.22 | 0.14 | -1.975 | -4.4 | -0.788 | -1.6 |
18 | 0.293 | 0.756 | 1.431 | 1.32 | -3.126 | -3.126 | -2.584 | -1.6 | -1.215 | -0.938 | -0.788 | -0.392 | -1.022 | -0.788 | -0.074 | -0.392 |
19 | -0.346 | -0.658 | -0.599 | -1.328 | -0.074 | -0.26 | -1.975 | 0.167 | 0.112 | 0.932 | -0.543 | 0.339 | -0.108 | 0.741 | 0.054 | 0.219 |