Transcription factor | BHLHE40 (GeneCards) | ||||||||
Model | BHE40_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 10 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndCACGKGMv | ||||||||
Best auROC (human) | 0.882 | ||||||||
Best auROC (mouse) | 0.957 | ||||||||
Peak sets in benchmark (human) | 10 | ||||||||
Peak sets in benchmark (mouse) | 5 | ||||||||
Aligned words | 533 | ||||||||
TF family | Hairy-related factors {1.2.4} | ||||||||
TF subfamily | Hairy-like factors {1.2.4.1} | ||||||||
HGNC | HGNC:1046 | ||||||||
EntrezGene | GeneID:8553 (SSTAR profile) | ||||||||
UniProt ID | BHE40_HUMAN | ||||||||
UniProt AC | O14503 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | BHLHE40 expression | ||||||||
ReMap ChIP-seq dataset list | BHLHE40 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 36.0 | 1.0 | 71.0 | 15.0 | 31.0 | 16.0 | 47.0 | 43.0 | 21.0 | 25.0 | 67.0 | 39.0 | 16.0 | 19.0 | 35.0 | 18.0 |
02 | 45.0 | 55.0 | 4.0 | 0.0 | 2.0 | 58.0 | 1.0 | 0.0 | 24.0 | 193.0 | 2.0 | 1.0 | 3.0 | 110.0 | 0.0 | 2.0 |
03 | 69.0 | 2.0 | 2.0 | 1.0 | 415.0 | 0.0 | 1.0 | 0.0 | 4.0 | 0.0 | 2.0 | 1.0 | 3.0 | 0.0 | 0.0 | 0.0 |
04 | 2.0 | 454.0 | 35.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 5.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
05 | 1.0 | 0.0 | 1.0 | 0.0 | 93.0 | 0.0 | 356.0 | 14.0 | 4.0 | 1.0 | 29.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
06 | 7.0 | 2.0 | 14.0 | 75.0 | 0.0 | 0.0 | 0.0 | 1.0 | 33.0 | 15.0 | 29.0 | 309.0 | 2.0 | 1.0 | 2.0 | 10.0 |
07 | 1.0 | 2.0 | 39.0 | 0.0 | 0.0 | 0.0 | 16.0 | 2.0 | 0.0 | 1.0 | 44.0 | 0.0 | 3.0 | 1.0 | 391.0 | 0.0 |
08 | 3.0 | 0.0 | 0.0 | 1.0 | 4.0 | 0.0 | 0.0 | 0.0 | 307.0 | 176.0 | 2.0 | 5.0 | 2.0 | 0.0 | 0.0 | 0.0 |
09 | 22.0 | 176.0 | 72.0 | 46.0 | 60.0 | 61.0 | 16.0 | 39.0 | 1.0 | 0.0 | 0.0 | 1.0 | 4.0 | 1.0 | 1.0 | 0.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.14 | -3.126 | 0.814 | -0.721 | -0.008 | -0.658 | 0.404 | 0.316 | -0.392 | -0.22 | 0.756 | 0.219 | -0.658 | -0.49 | 0.112 | -0.543 |
02 | 0.361 | 0.56 | -1.975 | -4.4 | -2.584 | 0.613 | -3.126 | -4.4 | -0.26 | 1.81 | -2.584 | -3.126 | -2.234 | 1.25 | -4.4 | -2.584 |
03 | 0.785 | -2.584 | -2.584 | -3.126 | 2.575 | -4.4 | -3.126 | -4.4 | -1.975 | -4.4 | -2.584 | -3.126 | -2.234 | -4.4 | -4.4 | -4.4 |
04 | -2.584 | 2.665 | 0.112 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | -1.77 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 |
05 | -3.126 | -4.4 | -3.126 | -4.4 | 1.082 | -4.4 | 2.422 | -0.788 | -1.975 | -3.126 | -0.074 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 |
06 | -1.454 | -2.584 | -0.788 | 0.868 | -4.4 | -4.4 | -4.4 | -3.126 | 0.054 | -0.721 | -0.074 | 2.28 | -2.584 | -3.126 | -2.584 | -1.114 |
07 | -3.126 | -2.584 | 0.219 | -4.4 | -4.4 | -4.4 | -0.658 | -2.584 | -4.4 | -3.126 | 0.339 | -4.4 | -2.234 | -3.126 | 2.515 | -4.4 |
08 | -2.234 | -4.4 | -4.4 | -3.126 | -1.975 | -4.4 | -4.4 | -4.4 | 2.274 | 1.718 | -2.584 | -1.77 | -2.584 | -4.4 | -4.4 | -4.4 |
09 | -0.346 | 1.718 | 0.828 | 0.383 | 0.646 | 0.663 | -0.658 | 0.219 | -3.126 | -4.4 | -4.4 | -3.126 | -1.975 | -3.126 | -3.126 | -4.4 |