Transcription factor | ESR2 (GeneCards) | ||||||||
Model | ESR2_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 19 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndRRnYWvbvTGACCYnvn | ||||||||
Best auROC (human) | 0.949 | ||||||||
Best auROC (mouse) | 0.934 | ||||||||
Peak sets in benchmark (human) | 11 | ||||||||
Peak sets in benchmark (mouse) | 7 | ||||||||
Aligned words | 513 | ||||||||
TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
HGNC | HGNC:3468 | ||||||||
EntrezGene | GeneID:2100 (SSTAR profile) | ||||||||
UniProt ID | ESR2_HUMAN | ||||||||
UniProt AC | Q92731 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ESR2 expression | ||||||||
ReMap ChIP-seq dataset list | ESR2 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 41.0 | 17.0 | 51.0 | 6.0 | 111.0 | 10.0 | 25.0 | 25.0 | 82.0 | 6.0 | 45.0 | 8.0 | 16.0 | 2.0 | 48.0 | 7.0 |
02 | 34.0 | 4.0 | 200.0 | 12.0 | 11.0 | 1.0 | 10.0 | 13.0 | 26.0 | 5.0 | 128.0 | 10.0 | 1.0 | 0.0 | 41.0 | 4.0 |
03 | 15.0 | 2.0 | 54.0 | 1.0 | 3.0 | 2.0 | 2.0 | 3.0 | 51.0 | 25.0 | 277.0 | 26.0 | 6.0 | 2.0 | 27.0 | 4.0 |
04 | 20.0 | 12.0 | 32.0 | 11.0 | 18.0 | 8.0 | 0.0 | 5.0 | 69.0 | 53.0 | 130.0 | 108.0 | 2.0 | 7.0 | 11.0 | 14.0 |
05 | 3.0 | 83.0 | 10.0 | 13.0 | 1.0 | 58.0 | 0.0 | 21.0 | 2.0 | 157.0 | 4.0 | 10.0 | 1.0 | 89.0 | 19.0 | 29.0 |
06 | 4.0 | 0.0 | 1.0 | 2.0 | 273.0 | 10.0 | 31.0 | 73.0 | 17.0 | 5.0 | 7.0 | 4.0 | 31.0 | 2.0 | 35.0 | 5.0 |
07 | 55.0 | 93.0 | 128.0 | 49.0 | 5.0 | 6.0 | 2.0 | 4.0 | 15.0 | 28.0 | 19.0 | 12.0 | 11.0 | 26.0 | 32.0 | 15.0 |
08 | 13.0 | 30.0 | 35.0 | 8.0 | 33.0 | 46.0 | 39.0 | 35.0 | 19.0 | 45.0 | 84.0 | 33.0 | 6.0 | 23.0 | 24.0 | 27.0 |
09 | 11.0 | 20.0 | 40.0 | 0.0 | 33.0 | 75.0 | 17.0 | 19.0 | 29.0 | 40.0 | 110.0 | 3.0 | 7.0 | 34.0 | 59.0 | 3.0 |
10 | 2.0 | 8.0 | 3.0 | 67.0 | 3.0 | 4.0 | 0.0 | 162.0 | 3.0 | 17.0 | 3.0 | 203.0 | 0.0 | 3.0 | 1.0 | 21.0 |
11 | 0.0 | 1.0 | 7.0 | 0.0 | 0.0 | 4.0 | 28.0 | 0.0 | 0.0 | 2.0 | 5.0 | 0.0 | 5.0 | 12.0 | 435.0 | 1.0 |
12 | 5.0 | 0.0 | 0.0 | 0.0 | 17.0 | 1.0 | 0.0 | 1.0 | 427.0 | 38.0 | 1.0 | 9.0 | 1.0 | 0.0 | 0.0 | 0.0 |
13 | 4.0 | 437.0 | 1.0 | 8.0 | 0.0 | 39.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 10.0 | 0.0 | 0.0 |
14 | 1.0 | 3.0 | 0.0 | 0.0 | 72.0 | 388.0 | 0.0 | 27.0 | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 6.0 | 0.0 | 0.0 |
15 | 0.0 | 24.0 | 6.0 | 45.0 | 12.0 | 122.0 | 12.0 | 252.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 21.0 | 3.0 | 3.0 |
16 | 1.0 | 4.0 | 5.0 | 2.0 | 60.0 | 24.0 | 17.0 | 66.0 | 3.0 | 0.0 | 10.0 | 8.0 | 44.0 | 57.0 | 110.0 | 89.0 |
17 | 10.0 | 13.0 | 66.0 | 19.0 | 41.0 | 15.0 | 15.0 | 14.0 | 34.0 | 25.0 | 69.0 | 14.0 | 27.0 | 19.0 | 103.0 | 16.0 |
18 | 23.0 | 31.0 | 45.0 | 13.0 | 22.0 | 17.0 | 5.0 | 28.0 | 71.0 | 62.0 | 89.0 | 31.0 | 13.0 | 23.0 | 15.0 | 12.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.269 | -0.599 | 0.485 | -1.6 | 1.259 | -1.114 | -0.22 | -0.22 | 0.957 | -1.6 | 0.361 | -1.328 | -0.658 | -2.584 | 0.425 | -1.454 |
02 | 0.083 | -1.975 | 1.846 | -0.938 | -1.022 | -3.126 | -1.114 | -0.86 | -0.181 | -1.77 | 1.401 | -1.114 | -3.126 | -4.4 | 0.269 | -1.975 |
03 | -0.721 | -2.584 | 0.542 | -3.126 | -2.234 | -2.584 | -2.584 | -2.234 | 0.485 | -0.22 | 2.171 | -0.181 | -1.6 | -2.584 | -0.144 | -1.975 |
04 | -0.439 | -0.938 | 0.023 | -1.022 | -0.543 | -1.328 | -4.4 | -1.77 | 0.785 | 0.523 | 1.416 | 1.231 | -2.584 | -1.454 | -1.022 | -0.788 |
05 | -2.234 | 0.969 | -1.114 | -0.86 | -3.126 | 0.613 | -4.4 | -0.392 | -2.584 | 1.604 | -1.975 | -1.114 | -3.126 | 1.039 | -0.49 | -0.074 |
06 | -1.975 | -4.4 | -3.126 | -2.584 | 2.157 | -1.114 | -0.008 | 0.841 | -0.599 | -1.77 | -1.454 | -1.975 | -0.008 | -2.584 | 0.112 | -1.77 |
07 | 0.56 | 1.082 | 1.401 | 0.445 | -1.77 | -1.6 | -2.584 | -1.975 | -0.721 | -0.108 | -0.49 | -0.938 | -1.022 | -0.181 | 0.023 | -0.721 |
08 | -0.86 | -0.04 | 0.112 | -1.328 | 0.054 | 0.383 | 0.219 | 0.112 | -0.49 | 0.361 | 0.981 | 0.054 | -1.6 | -0.302 | -0.26 | -0.144 |
09 | -1.022 | -0.439 | 0.244 | -4.4 | 0.054 | 0.868 | -0.599 | -0.49 | -0.074 | 0.244 | 1.25 | -2.234 | -1.454 | 0.083 | 0.63 | -2.234 |
10 | -2.584 | -1.328 | -2.234 | 0.756 | -2.234 | -1.975 | -4.4 | 1.636 | -2.234 | -0.599 | -2.234 | 1.861 | -4.4 | -2.234 | -3.126 | -0.392 |
11 | -4.4 | -3.126 | -1.454 | -4.4 | -4.4 | -1.975 | -0.108 | -4.4 | -4.4 | -2.584 | -1.77 | -4.4 | -1.77 | -0.938 | 2.622 | -3.126 |
12 | -1.77 | -4.4 | -4.4 | -4.4 | -0.599 | -3.126 | -4.4 | -3.126 | 2.603 | 0.193 | -3.126 | -1.215 | -3.126 | -4.4 | -4.4 | -4.4 |
13 | -1.975 | 2.626 | -3.126 | -1.328 | -4.4 | 0.219 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -1.114 | -4.4 | -4.4 |
14 | -3.126 | -2.234 | -4.4 | -4.4 | 0.828 | 2.508 | -4.4 | -0.144 | -4.4 | -3.126 | -4.4 | -4.4 | -2.584 | -1.6 | -4.4 | -4.4 |
15 | -4.4 | -0.26 | -1.6 | 0.361 | -0.938 | 1.353 | -0.938 | 2.077 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -0.392 | -2.234 | -2.234 |
16 | -3.126 | -1.975 | -1.77 | -2.584 | 0.646 | -0.26 | -0.599 | 0.741 | -2.234 | -4.4 | -1.114 | -1.328 | 0.339 | 0.595 | 1.25 | 1.039 |
17 | -1.114 | -0.86 | 0.741 | -0.49 | 0.269 | -0.721 | -0.721 | -0.788 | 0.083 | -0.22 | 0.785 | -0.788 | -0.144 | -0.49 | 1.184 | -0.658 |
18 | -0.302 | -0.008 | 0.361 | -0.86 | -0.346 | -0.599 | -1.77 | -0.108 | 0.814 | 0.679 | 1.039 | -0.008 | -0.86 | -0.302 | -0.721 | -0.938 |