Transcription factor | NFYB (GeneCards) | ||||||||
Model | NFYB_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nbRRCCAATSRvvRn | ||||||||
Best auROC (human) | 0.991 | ||||||||
Best auROC (mouse) | 0.998 | ||||||||
Peak sets in benchmark (human) | 4 | ||||||||
Peak sets in benchmark (mouse) | 4 | ||||||||
Aligned words | 509 | ||||||||
TF family | Heteromeric CCAAT-binding factors {4.2.1} | ||||||||
TF subfamily | NF-YB (CP1B, CBF-A) {4.2.1.0.2} | ||||||||
HGNC | HGNC:7805 | ||||||||
EntrezGene | GeneID:4801 (SSTAR profile) | ||||||||
UniProt ID | NFYB_HUMAN | ||||||||
UniProt AC | P25208 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | NFYB expression | ||||||||
ReMap ChIP-seq dataset list | NFYB datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 6.0 | 40.0 | 23.0 | 14.0 | 11.0 | 43.0 | 18.0 | 74.0 | 2.0 | 50.0 | 17.0 | 45.0 | 19.0 | 63.0 | 24.0 | 51.0 |
02 | 21.0 | 2.0 | 14.0 | 1.0 | 145.0 | 12.0 | 35.0 | 4.0 | 55.0 | 0.0 | 26.0 | 1.0 | 98.0 | 8.0 | 77.0 | 1.0 |
03 | 89.0 | 5.0 | 210.0 | 15.0 | 14.0 | 0.0 | 6.0 | 2.0 | 58.0 | 4.0 | 55.0 | 35.0 | 4.0 | 0.0 | 2.0 | 1.0 |
04 | 0.0 | 165.0 | 0.0 | 0.0 | 0.0 | 9.0 | 0.0 | 0.0 | 1.0 | 272.0 | 0.0 | 0.0 | 0.0 | 53.0 | 0.0 | 0.0 |
05 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 498.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
06 | 0.0 | 0.0 | 0.0 | 0.0 | 497.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
07 | 489.0 | 2.0 | 6.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
08 | 0.0 | 5.0 | 0.0 | 486.0 | 0.0 | 0.0 | 0.0 | 2.0 | 1.0 | 0.0 | 0.0 | 5.0 | 0.0 | 0.0 | 0.0 | 1.0 |
09 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 5.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 57.0 | 297.0 | 117.0 | 23.0 |
10 | 16.0 | 0.0 | 40.0 | 1.0 | 241.0 | 15.0 | 42.0 | 5.0 | 77.0 | 0.0 | 40.0 | 0.0 | 18.0 | 0.0 | 5.0 | 0.0 |
11 | 58.0 | 46.0 | 221.0 | 27.0 | 6.0 | 2.0 | 4.0 | 3.0 | 27.0 | 26.0 | 63.0 | 11.0 | 2.0 | 3.0 | 1.0 | 0.0 |
12 | 47.0 | 33.0 | 10.0 | 3.0 | 40.0 | 7.0 | 9.0 | 21.0 | 174.0 | 67.0 | 29.0 | 19.0 | 17.0 | 15.0 | 5.0 | 4.0 |
13 | 131.0 | 5.0 | 123.0 | 19.0 | 43.0 | 3.0 | 58.0 | 18.0 | 27.0 | 3.0 | 16.0 | 7.0 | 11.0 | 0.0 | 30.0 | 6.0 |
14 | 35.0 | 55.0 | 74.0 | 48.0 | 5.0 | 2.0 | 2.0 | 2.0 | 52.0 | 84.0 | 51.0 | 40.0 | 3.0 | 14.0 | 21.0 | 12.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -1.6 | 0.244 | -0.302 | -0.788 | -1.022 | 0.316 | -0.543 | 0.855 | -2.584 | 0.465 | -0.599 | 0.361 | -0.49 | 0.695 | -0.26 | 0.485 |
02 | -0.392 | -2.584 | -0.788 | -3.126 | 1.525 | -0.938 | 0.112 | -1.975 | 0.56 | -4.4 | -0.181 | -3.126 | 1.135 | -1.328 | 0.894 | -3.126 |
03 | 1.039 | -1.77 | 1.895 | -0.721 | -0.788 | -4.4 | -1.6 | -2.584 | 0.613 | -1.975 | 0.56 | 0.112 | -1.975 | -4.4 | -2.584 | -3.126 |
04 | -4.4 | 1.654 | -4.4 | -4.4 | -4.4 | -1.215 | -4.4 | -4.4 | -3.126 | 2.153 | -4.4 | -4.4 | -4.4 | 0.523 | -4.4 | -4.4 |
05 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | 2.757 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
06 | -4.4 | -4.4 | -4.4 | -4.4 | 2.755 | -4.4 | -3.126 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 |
07 | 2.739 | -2.584 | -1.6 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 |
08 | -4.4 | -1.77 | -4.4 | 2.733 | -4.4 | -4.4 | -4.4 | -2.584 | -3.126 | -4.4 | -4.4 | -1.77 | -4.4 | -4.4 | -4.4 | -3.126 |
09 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -1.77 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | 0.595 | 2.241 | 1.311 | -0.302 |
10 | -0.658 | -4.4 | 0.244 | -3.126 | 2.032 | -0.721 | 0.293 | -1.77 | 0.894 | -4.4 | 0.244 | -4.4 | -0.543 | -4.4 | -1.77 | -4.4 |
11 | 0.613 | 0.383 | 1.946 | -0.144 | -1.6 | -2.584 | -1.975 | -2.234 | -0.144 | -0.181 | 0.695 | -1.022 | -2.584 | -2.234 | -3.126 | -4.4 |
12 | 0.404 | 0.054 | -1.114 | -2.234 | 0.244 | -1.454 | -1.215 | -0.392 | 1.707 | 0.756 | -0.074 | -0.49 | -0.599 | -0.721 | -1.77 | -1.975 |
13 | 1.424 | -1.77 | 1.361 | -0.49 | 0.316 | -2.234 | 0.613 | -0.543 | -0.144 | -2.234 | -0.658 | -1.454 | -1.022 | -4.4 | -0.04 | -1.6 |
14 | 0.112 | 0.56 | 0.855 | 0.425 | -1.77 | -2.584 | -2.584 | -2.584 | 0.504 | 0.981 | 0.485 | 0.244 | -2.234 | -0.788 | -0.392 | -0.938 |