Transcription factor | STAT5A (GeneCards) | ||||||||
Model | STA5A_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 25 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nddnndWKMhdRGAAddRvvnvddn | ||||||||
Best auROC (human) | 0.949 | ||||||||
Best auROC (mouse) | 0.984 | ||||||||
Peak sets in benchmark (human) | 24 | ||||||||
Peak sets in benchmark (mouse) | 127 | ||||||||
Aligned words | 503 | ||||||||
TF family | STAT factors {6.2.1} | ||||||||
TF subfamily | STAT5A {6.2.1.0.5} | ||||||||
HGNC | HGNC:11366 | ||||||||
EntrezGene | GeneID:6776 (SSTAR profile) | ||||||||
UniProt ID | STA5A_HUMAN | ||||||||
UniProt AC | P42229 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | STAT5A expression | ||||||||
ReMap ChIP-seq dataset list | STAT5A datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 64.0 | 10.0 | 69.0 | 19.0 | 45.0 | 19.0 | 10.0 | 24.0 | 31.0 | 11.0 | 37.0 | 12.0 | 7.0 | 26.0 | 94.0 | 22.0 |
02 | 50.0 | 10.0 | 39.0 | 48.0 | 37.0 | 10.0 | 8.0 | 11.0 | 98.0 | 36.0 | 62.0 | 14.0 | 12.0 | 19.0 | 35.0 | 11.0 |
03 | 40.0 | 42.0 | 92.0 | 23.0 | 16.0 | 31.0 | 3.0 | 25.0 | 33.0 | 41.0 | 43.0 | 27.0 | 19.0 | 37.0 | 20.0 | 8.0 |
04 | 35.0 | 11.0 | 39.0 | 23.0 | 80.0 | 25.0 | 15.0 | 31.0 | 33.0 | 23.0 | 45.0 | 57.0 | 14.0 | 5.0 | 34.0 | 30.0 |
05 | 28.0 | 27.0 | 44.0 | 63.0 | 18.0 | 7.0 | 4.0 | 35.0 | 39.0 | 24.0 | 35.0 | 35.0 | 18.0 | 9.0 | 27.0 | 87.0 |
06 | 17.0 | 1.0 | 6.0 | 79.0 | 13.0 | 2.0 | 3.0 | 49.0 | 18.0 | 9.0 | 14.0 | 69.0 | 7.0 | 8.0 | 12.0 | 193.0 |
07 | 22.0 | 4.0 | 20.0 | 9.0 | 5.0 | 1.0 | 10.0 | 4.0 | 10.0 | 4.0 | 18.0 | 3.0 | 32.0 | 16.0 | 37.0 | 305.0 |
08 | 36.0 | 21.0 | 11.0 | 1.0 | 9.0 | 10.0 | 3.0 | 3.0 | 52.0 | 22.0 | 7.0 | 4.0 | 16.0 | 289.0 | 3.0 | 13.0 |
09 | 55.0 | 16.0 | 34.0 | 8.0 | 29.0 | 125.0 | 10.0 | 178.0 | 8.0 | 3.0 | 8.0 | 5.0 | 2.0 | 4.0 | 12.0 | 3.0 |
10 | 21.0 | 14.0 | 31.0 | 28.0 | 88.0 | 16.0 | 14.0 | 30.0 | 26.0 | 6.0 | 28.0 | 4.0 | 45.0 | 29.0 | 71.0 | 49.0 |
11 | 49.0 | 2.0 | 128.0 | 1.0 | 52.0 | 1.0 | 11.0 | 1.0 | 72.0 | 4.0 | 67.0 | 1.0 | 40.0 | 0.0 | 71.0 | 0.0 |
12 | 1.0 | 2.0 | 210.0 | 0.0 | 0.0 | 0.0 | 7.0 | 0.0 | 5.0 | 0.0 | 272.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 |
13 | 6.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 488.0 | 0.0 | 2.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 |
14 | 478.0 | 0.0 | 10.0 | 7.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
15 | 228.0 | 60.0 | 122.0 | 71.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 2.0 | 6.0 | 1.0 | 0.0 | 0.0 | 7.0 | 0.0 |
16 | 50.0 | 33.0 | 74.0 | 74.0 | 7.0 | 8.0 | 3.0 | 44.0 | 29.0 | 7.0 | 25.0 | 74.0 | 10.0 | 14.0 | 23.0 | 25.0 |
17 | 18.0 | 8.0 | 59.0 | 11.0 | 21.0 | 14.0 | 25.0 | 2.0 | 24.0 | 6.0 | 90.0 | 5.0 | 22.0 | 22.0 | 165.0 | 8.0 |
18 | 24.0 | 17.0 | 37.0 | 7.0 | 24.0 | 8.0 | 9.0 | 9.0 | 132.0 | 27.0 | 156.0 | 24.0 | 3.0 | 6.0 | 16.0 | 1.0 |
19 | 92.0 | 19.0 | 65.0 | 7.0 | 37.0 | 13.0 | 4.0 | 4.0 | 55.0 | 17.0 | 119.0 | 27.0 | 14.0 | 5.0 | 14.0 | 8.0 |
20 | 69.0 | 15.0 | 59.0 | 55.0 | 21.0 | 17.0 | 4.0 | 12.0 | 71.0 | 27.0 | 49.0 | 55.0 | 3.0 | 4.0 | 19.0 | 20.0 |
21 | 67.0 | 19.0 | 62.0 | 16.0 | 27.0 | 13.0 | 14.0 | 9.0 | 45.0 | 28.0 | 30.0 | 28.0 | 25.0 | 16.0 | 85.0 | 16.0 |
22 | 40.0 | 26.0 | 70.0 | 28.0 | 32.0 | 16.0 | 9.0 | 19.0 | 42.0 | 16.0 | 98.0 | 35.0 | 18.0 | 12.0 | 21.0 | 18.0 |
23 | 43.0 | 8.0 | 59.0 | 22.0 | 27.0 | 7.0 | 14.0 | 22.0 | 71.0 | 11.0 | 82.0 | 34.0 | 12.0 | 6.0 | 50.0 | 32.0 |
24 | 63.0 | 25.0 | 42.0 | 23.0 | 9.0 | 10.0 | 6.0 | 7.0 | 59.0 | 52.0 | 60.0 | 34.0 | 13.0 | 32.0 | 36.0 | 29.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.711 | -1.114 | 0.785 | -0.49 | 0.361 | -0.49 | -1.114 | -0.26 | -0.008 | -1.022 | 0.167 | -0.938 | -1.454 | -0.181 | 1.093 | -0.346 |
02 | 0.465 | -1.114 | 0.219 | 0.425 | 0.167 | -1.114 | -1.328 | -1.022 | 1.135 | 0.14 | 0.679 | -0.788 | -0.938 | -0.49 | 0.112 | -1.022 |
03 | 0.244 | 0.293 | 1.072 | -0.302 | -0.658 | -0.008 | -2.234 | -0.22 | 0.054 | 0.269 | 0.316 | -0.144 | -0.49 | 0.167 | -0.439 | -1.328 |
04 | 0.112 | -1.022 | 0.219 | -0.302 | 0.932 | -0.22 | -0.721 | -0.008 | 0.054 | -0.302 | 0.361 | 0.595 | -0.788 | -1.77 | 0.083 | -0.04 |
05 | -0.108 | -0.144 | 0.339 | 0.695 | -0.543 | -1.454 | -1.975 | 0.112 | 0.219 | -0.26 | 0.112 | 0.112 | -0.543 | -1.215 | -0.144 | 1.016 |
06 | -0.599 | -3.126 | -1.6 | 0.92 | -0.86 | -2.584 | -2.234 | 0.445 | -0.543 | -1.215 | -0.788 | 0.785 | -1.454 | -1.328 | -0.938 | 1.81 |
07 | -0.346 | -1.975 | -0.439 | -1.215 | -1.77 | -3.126 | -1.114 | -1.975 | -1.114 | -1.975 | -0.543 | -2.234 | 0.023 | -0.658 | 0.167 | 2.267 |
08 | 0.14 | -0.392 | -1.022 | -3.126 | -1.215 | -1.114 | -2.234 | -2.234 | 0.504 | -0.346 | -1.454 | -1.975 | -0.658 | 2.213 | -2.234 | -0.86 |
09 | 0.56 | -0.658 | 0.083 | -1.328 | -0.074 | 1.377 | -1.114 | 1.73 | -1.328 | -2.234 | -1.328 | -1.77 | -2.584 | -1.975 | -0.938 | -2.234 |
10 | -0.392 | -0.788 | -0.008 | -0.108 | 1.027 | -0.658 | -0.788 | -0.04 | -0.181 | -1.6 | -0.108 | -1.975 | 0.361 | -0.074 | 0.814 | 0.445 |
11 | 0.445 | -2.584 | 1.401 | -3.126 | 0.504 | -3.126 | -1.022 | -3.126 | 0.828 | -1.975 | 0.756 | -3.126 | 0.244 | -4.4 | 0.814 | -4.4 |
12 | -3.126 | -2.584 | 1.895 | -4.4 | -4.4 | -4.4 | -1.454 | -4.4 | -1.77 | -4.4 | 2.153 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 |
13 | -1.6 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -3.126 | -4.4 | 2.737 | -4.4 | -2.584 | -2.584 | -4.4 | -4.4 | -4.4 | -4.4 |
14 | 2.716 | -4.4 | -1.114 | -1.454 | -4.4 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -3.126 | -4.4 | -3.126 | -4.4 | -3.126 | -4.4 |
15 | 1.977 | 0.646 | 1.353 | 0.814 | -4.4 | -4.4 | -4.4 | -4.4 | -2.234 | -2.584 | -1.6 | -3.126 | -4.4 | -4.4 | -1.454 | -4.4 |
16 | 0.465 | 0.054 | 0.855 | 0.855 | -1.454 | -1.328 | -2.234 | 0.339 | -0.074 | -1.454 | -0.22 | 0.855 | -1.114 | -0.788 | -0.302 | -0.22 |
17 | -0.543 | -1.328 | 0.63 | -1.022 | -0.392 | -0.788 | -0.22 | -2.584 | -0.26 | -1.6 | 1.05 | -1.77 | -0.346 | -0.346 | 1.654 | -1.328 |
18 | -0.26 | -0.599 | 0.167 | -1.454 | -0.26 | -1.328 | -1.215 | -1.215 | 1.431 | -0.144 | 1.598 | -0.26 | -2.234 | -1.6 | -0.658 | -3.126 |
19 | 1.072 | -0.49 | 0.726 | -1.454 | 0.167 | -0.86 | -1.975 | -1.975 | 0.56 | -0.599 | 1.328 | -0.144 | -0.788 | -1.77 | -0.788 | -1.328 |
20 | 0.785 | -0.721 | 0.63 | 0.56 | -0.392 | -0.599 | -1.975 | -0.938 | 0.814 | -0.144 | 0.445 | 0.56 | -2.234 | -1.975 | -0.49 | -0.439 |
21 | 0.756 | -0.49 | 0.679 | -0.658 | -0.144 | -0.86 | -0.788 | -1.215 | 0.361 | -0.108 | -0.04 | -0.108 | -0.22 | -0.658 | 0.993 | -0.658 |
22 | 0.244 | -0.181 | 0.8 | -0.108 | 0.023 | -0.658 | -1.215 | -0.49 | 0.293 | -0.658 | 1.135 | 0.112 | -0.543 | -0.938 | -0.392 | -0.543 |
23 | 0.316 | -1.328 | 0.63 | -0.346 | -0.144 | -1.454 | -0.788 | -0.346 | 0.814 | -1.022 | 0.957 | 0.083 | -0.938 | -1.6 | 0.465 | 0.023 |
24 | 0.695 | -0.22 | 0.293 | -0.302 | -1.215 | -1.114 | -1.6 | -1.454 | 0.63 | 0.504 | 0.646 | 0.083 | -0.86 | 0.023 | 0.14 | -0.074 |