Transcription factor | TFAP4 (GeneCards) | ||||||||
Model | TFAP4_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | hCAGCTGdKbnvvn | ||||||||
Best auROC (human) | 0.924 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 7 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 502 | ||||||||
TF family | bHLH-ZIP factors {1.2.6} | ||||||||
TF subfamily | AP-4 {1.2.6.4} | ||||||||
HGNC | HGNC:11745 | ||||||||
EntrezGene | GeneID:7023 (SSTAR profile) | ||||||||
UniProt ID | TFAP4_HUMAN | ||||||||
UniProt AC | Q01664 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | TFAP4 expression | ||||||||
ReMap ChIP-seq dataset list | TFAP4 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.0 | 110.0 | 0.0 | 0.0 | 1.0 | 209.0 | 0.0 | 0.0 | 0.0 | 75.0 | 2.0 | 0.0 | 0.0 | 103.0 | 0.0 | 0.0 |
02 | 1.0 | 0.0 | 0.0 | 0.0 | 494.0 | 0.0 | 1.0 | 2.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
03 | 1.0 | 13.0 | 482.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
04 | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 11.0 | 0.0 | 0.0 | 4.0 | 479.0 | 0.0 | 1.0 | 0.0 | 2.0 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 1.0 | 0.0 | 492.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 495.0 | 2.0 |
07 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 176.0 | 14.0 | 129.0 | 176.0 | 1.0 | 0.0 | 1.0 | 1.0 |
08 | 11.0 | 15.0 | 79.0 | 72.0 | 0.0 | 0.0 | 0.0 | 14.0 | 14.0 | 13.0 | 50.0 | 54.0 | 9.0 | 7.0 | 76.0 | 86.0 |
09 | 0.0 | 17.0 | 9.0 | 8.0 | 5.0 | 7.0 | 8.0 | 15.0 | 12.0 | 87.0 | 23.0 | 83.0 | 24.0 | 71.0 | 60.0 | 71.0 |
10 | 19.0 | 7.0 | 7.0 | 8.0 | 72.0 | 51.0 | 21.0 | 38.0 | 17.0 | 37.0 | 38.0 | 8.0 | 57.0 | 43.0 | 30.0 | 47.0 |
11 | 93.0 | 43.0 | 13.0 | 16.0 | 52.0 | 51.0 | 15.0 | 20.0 | 26.0 | 35.0 | 25.0 | 10.0 | 3.0 | 41.0 | 29.0 | 28.0 |
12 | 118.0 | 19.0 | 27.0 | 10.0 | 48.0 | 47.0 | 28.0 | 47.0 | 31.0 | 16.0 | 29.0 | 6.0 | 22.0 | 9.0 | 18.0 | 25.0 |
13 | 20.0 | 103.0 | 56.0 | 40.0 | 29.0 | 22.0 | 18.0 | 22.0 | 16.0 | 27.0 | 44.0 | 15.0 | 16.0 | 15.0 | 40.0 | 17.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -4.4 | 1.25 | -4.4 | -4.4 | -3.126 | 1.89 | -4.4 | -4.4 | -4.4 | 0.868 | -2.584 | -4.4 | -4.4 | 1.184 | -4.4 | -4.4 |
02 | -3.126 | -4.4 | -4.4 | -4.4 | 2.749 | -4.4 | -3.126 | -2.584 | -2.584 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
03 | -3.126 | -0.86 | 2.724 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -3.126 | -3.126 |
04 | -4.4 | -3.126 | -4.4 | -4.4 | -2.584 | -1.022 | -4.4 | -4.4 | -1.975 | 2.718 | -4.4 | -3.126 | -4.4 | -2.584 | -4.4 | -4.4 |
05 | -4.4 | -4.4 | -4.4 | -1.6 | -4.4 | -3.126 | -4.4 | 2.745 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 |
06 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -3.126 | 2.751 | -2.584 |
07 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -3.126 | -4.4 | 1.718 | -0.788 | 1.408 | 1.718 | -3.126 | -4.4 | -3.126 | -3.126 |
08 | -1.022 | -0.721 | 0.92 | 0.828 | -4.4 | -4.4 | -4.4 | -0.788 | -0.788 | -0.86 | 0.465 | 0.542 | -1.215 | -1.454 | 0.881 | 1.004 |
09 | -4.4 | -0.599 | -1.215 | -1.328 | -1.77 | -1.454 | -1.328 | -0.721 | -0.938 | 1.016 | -0.302 | 0.969 | -0.26 | 0.814 | 0.646 | 0.814 |
10 | -0.49 | -1.454 | -1.454 | -1.328 | 0.828 | 0.485 | -0.392 | 0.193 | -0.599 | 0.167 | 0.193 | -1.328 | 0.595 | 0.316 | -0.04 | 0.404 |
11 | 1.082 | 0.316 | -0.86 | -0.658 | 0.504 | 0.485 | -0.721 | -0.439 | -0.181 | 0.112 | -0.22 | -1.114 | -2.234 | 0.269 | -0.074 | -0.108 |
12 | 1.32 | -0.49 | -0.144 | -1.114 | 0.425 | 0.404 | -0.108 | 0.404 | -0.008 | -0.658 | -0.074 | -1.6 | -0.346 | -1.215 | -0.543 | -0.22 |
13 | -0.439 | 1.184 | 0.578 | 0.244 | -0.074 | -0.346 | -0.543 | -0.346 | -0.658 | -0.144 | 0.339 | -0.721 | -0.658 | -0.721 | 0.244 | -0.599 |