Transcription factor | ZSCAN22 (GeneCards) | ||||||||
Model | ZSC22_HUMAN.H11DI.0.C | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 23 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | nbdRdShGAbGGMGGAGGSvvnv | ||||||||
Best auROC (human) | 0.932 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 428 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | unclassified {2.3.3.0} | ||||||||
HGNC | HGNC:4929 | ||||||||
EntrezGene | GeneID:342945 (SSTAR profile) | ||||||||
UniProt ID | ZSC22_HUMAN | ||||||||
UniProt AC | P10073 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ZSCAN22 expression | ||||||||
ReMap ChIP-seq dataset list | ZSCAN22 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 14.0 | 11.0 | 46.0 | 14.0 | 12.0 | 36.0 | 29.0 | 35.0 | 20.0 | 25.0 | 52.0 | 17.0 | 1.0 | 8.0 | 61.0 | 3.0 |
02 | 20.0 | 4.0 | 19.0 | 4.0 | 25.0 | 10.0 | 23.0 | 22.0 | 48.0 | 13.0 | 110.0 | 17.0 | 29.0 | 9.0 | 21.0 | 10.0 |
03 | 26.0 | 5.0 | 88.0 | 3.0 | 6.0 | 7.0 | 16.0 | 7.0 | 26.0 | 31.0 | 107.0 | 9.0 | 4.0 | 7.0 | 39.0 | 3.0 |
04 | 13.0 | 6.0 | 23.0 | 20.0 | 9.0 | 7.0 | 17.0 | 17.0 | 32.0 | 31.0 | 33.0 | 154.0 | 1.0 | 5.0 | 13.0 | 3.0 |
05 | 13.0 | 19.0 | 20.0 | 3.0 | 13.0 | 20.0 | 13.0 | 3.0 | 24.0 | 25.0 | 29.0 | 8.0 | 3.0 | 177.0 | 9.0 | 5.0 |
06 | 29.0 | 10.0 | 7.0 | 7.0 | 58.0 | 44.0 | 5.0 | 134.0 | 18.0 | 31.0 | 6.0 | 16.0 | 5.0 | 3.0 | 3.0 | 8.0 |
07 | 5.0 | 0.0 | 105.0 | 0.0 | 5.0 | 1.0 | 82.0 | 0.0 | 0.0 | 0.0 | 20.0 | 1.0 | 8.0 | 1.0 | 156.0 | 0.0 |
08 | 15.0 | 1.0 | 2.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 323.0 | 1.0 | 34.0 | 5.0 | 0.0 | 0.0 | 1.0 | 0.0 |
09 | 20.0 | 26.0 | 188.0 | 104.0 | 0.0 | 0.0 | 1.0 | 2.0 | 6.0 | 5.0 | 7.0 | 19.0 | 4.0 | 1.0 | 1.0 | 0.0 |
10 | 2.0 | 0.0 | 28.0 | 0.0 | 6.0 | 0.0 | 24.0 | 2.0 | 13.0 | 0.0 | 184.0 | 0.0 | 2.0 | 1.0 | 122.0 | 0.0 |
11 | 0.0 | 0.0 | 23.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 8.0 | 0.0 | 349.0 | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 |
12 | 2.0 | 0.0 | 4.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 194.0 | 136.0 | 20.0 | 25.0 | 1.0 | 0.0 | 0.0 | 0.0 |
13 | 17.0 | 0.0 | 180.0 | 0.0 | 16.0 | 1.0 | 117.0 | 2.0 | 1.0 | 0.0 | 23.0 | 0.0 | 2.0 | 0.0 | 25.0 | 0.0 |
14 | 0.0 | 0.0 | 33.0 | 3.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 2.0 | 340.0 | 2.0 | 0.0 | 0.0 | 2.0 | 0.0 |
15 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 289.0 | 77.0 | 4.0 | 6.0 | 2.0 | 3.0 | 0.0 | 0.0 |
16 | 8.0 | 0.0 | 281.0 | 2.0 | 8.0 | 1.0 | 66.0 | 6.0 | 1.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 8.0 | 0.0 |
17 | 5.0 | 0.0 | 10.0 | 2.0 | 0.0 | 1.0 | 0.0 | 0.0 | 18.0 | 6.0 | 328.0 | 6.0 | 2.0 | 0.0 | 4.0 | 2.0 |
18 | 1.0 | 19.0 | 5.0 | 0.0 | 1.0 | 5.0 | 0.0 | 1.0 | 36.0 | 209.0 | 56.0 | 41.0 | 0.0 | 4.0 | 3.0 | 3.0 |
19 | 9.0 | 5.0 | 23.0 | 1.0 | 71.0 | 61.0 | 75.0 | 30.0 | 10.0 | 12.0 | 34.0 | 8.0 | 10.0 | 8.0 | 22.0 | 5.0 |
20 | 22.0 | 17.0 | 53.0 | 8.0 | 23.0 | 15.0 | 38.0 | 10.0 | 13.0 | 65.0 | 67.0 | 9.0 | 3.0 | 7.0 | 30.0 | 4.0 |
21 | 12.0 | 6.0 | 32.0 | 11.0 | 15.0 | 21.0 | 11.0 | 57.0 | 39.0 | 53.0 | 69.0 | 27.0 | 6.0 | 4.0 | 17.0 | 4.0 |
22 | 8.0 | 9.0 | 50.0 | 5.0 | 20.0 | 7.0 | 46.0 | 11.0 | 38.0 | 25.0 | 51.0 | 15.0 | 13.0 | 9.0 | 71.0 | 6.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.528 | -0.762 | 0.643 | -0.528 | -0.678 | 0.4 | 0.187 | 0.372 | -0.179 | 0.04 | 0.765 | -0.339 | -2.877 | -1.069 | 0.924 | -1.978 |
02 | -0.179 | -1.718 | -0.23 | -1.718 | 0.04 | -0.854 | -0.042 | -0.086 | 0.685 | -0.6 | 1.51 | -0.339 | 0.187 | -0.956 | -0.131 | -0.854 |
03 | 0.079 | -1.512 | 1.288 | -1.978 | -1.342 | -1.196 | -0.398 | -1.196 | 0.079 | 0.252 | 1.483 | -0.956 | -1.718 | -1.196 | 0.48 | -1.978 |
04 | -0.6 | -1.342 | -0.042 | -0.179 | -0.956 | -1.196 | -0.339 | -0.339 | 0.284 | 0.252 | 0.314 | 1.846 | -2.877 | -1.512 | -0.6 | -1.978 |
05 | -0.6 | -0.23 | -0.179 | -1.978 | -0.6 | -0.179 | -0.6 | -1.978 | 0.0 | 0.04 | 0.187 | -1.069 | -1.978 | 1.985 | -0.956 | -1.512 |
06 | 0.187 | -0.854 | -1.196 | -1.196 | 0.873 | 0.599 | -1.512 | 1.707 | -0.283 | 0.252 | -1.342 | -0.398 | -1.512 | -1.978 | -1.978 | -1.069 |
07 | -1.512 | -4.183 | 1.464 | -4.183 | -1.512 | -2.877 | 1.218 | -4.183 | -4.183 | -4.183 | -0.179 | -2.877 | -1.069 | -2.877 | 1.859 | -4.183 |
08 | -0.461 | -2.877 | -2.33 | -4.183 | -4.183 | -2.877 | -4.183 | -2.877 | 2.585 | -2.877 | 0.344 | -1.512 | -4.183 | -4.183 | -2.877 | -4.183 |
09 | -0.179 | 0.079 | 2.045 | 1.455 | -4.183 | -4.183 | -2.877 | -2.33 | -1.342 | -1.512 | -1.196 | -0.23 | -1.718 | -2.877 | -2.877 | -4.183 |
10 | -2.33 | -4.183 | 0.152 | -4.183 | -1.342 | -4.183 | 0.0 | -2.33 | -0.6 | -4.183 | 2.024 | -4.183 | -2.33 | -2.877 | 1.614 | -4.183 |
11 | -4.183 | -4.183 | -0.042 | -4.183 | -4.183 | -4.183 | -2.877 | -4.183 | -1.069 | -4.183 | 2.663 | -2.877 | -4.183 | -4.183 | -2.33 | -4.183 |
12 | -2.33 | -4.183 | -1.718 | -2.33 | -4.183 | -4.183 | -4.183 | -4.183 | 2.076 | 1.722 | -0.179 | 0.04 | -2.877 | -4.183 | -4.183 | -4.183 |
13 | -0.339 | -4.183 | 2.002 | -4.183 | -0.398 | -2.877 | 1.572 | -2.33 | -2.877 | -4.183 | -0.042 | -4.183 | -2.33 | -4.183 | 0.04 | -4.183 |
14 | -4.183 | -4.183 | 0.314 | -1.978 | -4.183 | -4.183 | -2.877 | -4.183 | -2.877 | -2.33 | 2.637 | -2.33 | -4.183 | -4.183 | -2.33 | -4.183 |
15 | -4.183 | -4.183 | -4.183 | -2.877 | -4.183 | -2.877 | -4.183 | -2.877 | 2.474 | 1.155 | -1.718 | -1.342 | -2.33 | -1.978 | -4.183 | -4.183 |
16 | -1.069 | -4.183 | 2.446 | -2.33 | -1.069 | -2.877 | 1.002 | -1.342 | -2.877 | -4.183 | -1.978 | -4.183 | -4.183 | -4.183 | -1.069 | -4.183 |
17 | -1.512 | -4.183 | -0.854 | -2.33 | -4.183 | -2.877 | -4.183 | -4.183 | -0.283 | -1.342 | 2.601 | -1.342 | -2.33 | -4.183 | -1.718 | -2.33 |
18 | -2.877 | -0.23 | -1.512 | -4.183 | -2.877 | -1.512 | -4.183 | -2.877 | 0.4 | 2.151 | 0.839 | 0.529 | -4.183 | -1.718 | -1.978 | -1.978 |
19 | -0.956 | -1.512 | -0.042 | -2.877 | 1.074 | 0.924 | 1.129 | 0.22 | -0.854 | -0.678 | 0.344 | -1.069 | -0.854 | -1.069 | -0.086 | -1.512 |
20 | -0.086 | -0.339 | 0.784 | -1.069 | -0.042 | -0.461 | 0.454 | -0.854 | -0.6 | 0.987 | 1.017 | -0.956 | -1.978 | -1.196 | 0.22 | -1.718 |
21 | -0.678 | -1.342 | 0.284 | -0.762 | -0.461 | -0.131 | -0.762 | 0.856 | 0.48 | 0.784 | 1.046 | 0.116 | -1.342 | -1.718 | -0.339 | -1.718 |
22 | -1.069 | -0.956 | 0.726 | -1.512 | -0.179 | -1.196 | 0.643 | -0.762 | 0.454 | 0.04 | 0.746 | -0.461 | -0.6 | -0.956 | 1.074 | -1.342 |