We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorALX1
(GeneCards)
ModelALX1_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
B
Motif rank
0
ConsensusvTRATYGnATTA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words33
TF familyPaired-related HD factors {3.1.3}
TF subfamilyALX {3.1.3.1}
HGNCHGNC:1494
EntrezGeneGeneID:8092
(SSTAR profile)
UniProt IDALX1_HUMAN
UniProt ACQ15699
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.600009999999999
0.0005 6.364215
0.0001 7.75592
GTEx tissue expression atlas ALX1 expression
ReMap ChIP-seq dataset list ALX1 datasets
Motifs in JASPAR
PCM
ACGT
0113.5426.4818.4672.51
021.9862.9790.026.036
0323.940.9933.0892.979
0426.9181.9860.02.096
050.02.9790.028.021
060.9937.063.97218.975
0715.0040.015.9960.0
0811.0327.94311.0320.993
0924.050.03.9722.979
103.0890.00.99326.918
111.9860.9930.99327.028
1225.7051.7651.7651.765
PWM
ACGT
010.515-0.1590.08-0.938
02-1.107-0.808-2.3051.139
031.058-1.537-0.78-0.808
041.171-1.107-2.305-1.069
05-2.305-0.808-2.3051.21
06-1.537-0.083-0.5780.835
070.611-2.3050.672-2.305
080.3230.0220.323-1.537
091.062-2.305-0.578-0.808
10-0.78-2.305-1.5371.171
11-1.107-1.537-1.5371.175
121.127-1.188-1.188-1.188