Transcription factor | ALX3 (GeneCards) | ||||||||
Model | ALX3_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | HT-SELEX | ||||||||
Model release | HOCOMOCOv10 | ||||||||
Model length | 11 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | TAATTARMTWW | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 8583 | ||||||||
TF family | Paired-related HD factors {3.1.3} | ||||||||
TF subfamily | ALX {3.1.3.1} | ||||||||
HGNC | HGNC:449 | ||||||||
EntrezGene | GeneID:257 (SSTAR profile) | ||||||||
UniProt ID | ALX3_HUMAN | ||||||||
UniProt AC | O95076 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ALX3 expression | ||||||||
ReMap ChIP-seq dataset list | ALX3 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 488.827 | 241.194 | 103.262 | 7402.663 |
02 | 7702.769 | 7.26 | 104.861 | 421.056 |
03 | 8234.534 | 0.202 | 1.008 | 0.202 |
04 | 4.033 | 33.071 | 1.613 | 8197.228 |
05 | 56.463 | 904.223 | 137.126 | 7138.134 |
06 | 5791.826 | 13.713 | 2430.407 | 0.0 |
07 | 3927.712 | 736.661 | 3394.706 | 176.866 |
08 | 5422.944 | 1306.983 | 1088.161 | 417.858 |
09 | 184.946 | 167.201 | 155.101 | 7728.697 |
10 | 1410.188 | 504.181 | 250.902 | 6070.675 |
11 | 6593.249 | 375.755 | 472.55 | 794.392 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.434 | -2.136 | -2.972 | 1.279 |
02 | 1.319 | -5.378 | -2.957 | -1.583 |
03 | 1.385 | -6.733 | -6.449 | -6.733 |
04 | -5.793 | -4.066 | -6.279 | 1.381 |
05 | -3.558 | -0.821 | -2.694 | 1.242 |
06 | 1.034 | -4.861 | 0.166 | -6.818 |
07 | 0.645 | -1.026 | 0.5 | -2.443 |
08 | 0.968 | -0.454 | -0.637 | -1.591 |
09 | -2.399 | -2.498 | -2.573 | 1.322 |
10 | -0.378 | -1.404 | -2.097 | 1.081 |
11 | 1.163 | -1.696 | -1.468 | -0.951 |