Model info
| Transcription factor | ALX3 (GeneCards) | ||||||||
| Model | ALX3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TAATTARMTWW | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8583 | ||||||||
| TF family | Paired-related HD factors {3.1.3} | ||||||||
| TF subfamily | ALX {3.1.3.1} | ||||||||
| HGNC | HGNC:449 | ||||||||
| EntrezGene | GeneID:257 (SSTAR profile) | ||||||||
| UniProt ID | ALX3_HUMAN | ||||||||
| UniProt AC | O95076 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ALX3 expression | ||||||||
| ReMap ChIP-seq dataset list | ALX3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 488.827 | 241.194 | 103.262 | 7402.663 |
| 02 | 7702.769 | 7.26 | 104.861 | 421.056 |
| 03 | 8234.534 | 0.202 | 1.008 | 0.202 |
| 04 | 4.033 | 33.071 | 1.613 | 8197.228 |
| 05 | 56.463 | 904.223 | 137.126 | 7138.134 |
| 06 | 5791.826 | 13.713 | 2430.407 | 0.0 |
| 07 | 3927.712 | 736.661 | 3394.706 | 176.866 |
| 08 | 5422.944 | 1306.983 | 1088.161 | 417.858 |
| 09 | 184.946 | 167.201 | 155.101 | 7728.697 |
| 10 | 1410.188 | 504.181 | 250.902 | 6070.675 |
| 11 | 6593.249 | 375.755 | 472.55 | 794.392 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.434 | -2.136 | -2.972 | 1.279 |
| 02 | 1.319 | -5.378 | -2.957 | -1.583 |
| 03 | 1.385 | -6.733 | -6.449 | -6.733 |
| 04 | -5.793 | -4.066 | -6.279 | 1.381 |
| 05 | -3.558 | -0.821 | -2.694 | 1.242 |
| 06 | 1.034 | -4.861 | 0.166 | -6.818 |
| 07 | 0.645 | -1.026 | 0.5 | -2.443 |
| 08 | 0.968 | -0.454 | -0.637 | -1.591 |
| 09 | -2.399 | -2.498 | -2.573 | 1.322 |
| 10 | -0.378 | -1.404 | -2.097 | 1.081 |
| 11 | 1.163 | -1.696 | -1.468 | -0.951 |