We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorALX3
(GeneCards)
ModelALX3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusTAATTARMTWW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8583
TF familyPaired-related HD factors {3.1.3}
TF subfamilyALX {3.1.3.1}
HGNCHGNC:449
EntrezGeneGeneID:257
(SSTAR profile)
UniProt IDALX3_HUMAN
UniProt ACO95076
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.704079999999999
0.0005 5.880364999999999
0.0001 8.139769999999999
GTEx tissue expression atlas ALX3 expression
ReMap ChIP-seq dataset list ALX3 datasets
Motifs in JASPAR
PCM
ACGT
01488.827241.194103.2627402.663
027702.7697.26104.861421.056
038234.5340.2021.0080.202
044.03333.0711.6138197.228
0556.463904.223137.1267138.134
065791.82613.7132430.4070.0
073927.712736.6613394.706176.866
085422.9441306.9831088.161417.858
09184.946167.201155.1017728.697
101410.188504.181250.9026070.675
116593.249375.755472.55794.392
PWM
ACGT
01-1.434-2.136-2.9721.279
021.319-5.378-2.957-1.583
031.385-6.733-6.449-6.733
04-5.793-4.066-6.2791.381
05-3.558-0.821-2.6941.242
061.034-4.8610.166-6.818
070.645-1.0260.5-2.443
080.968-0.454-0.637-1.591
09-2.399-2.498-2.5731.322
10-0.378-1.404-2.0971.081
111.163-1.696-1.468-0.951