We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorALX4
(GeneCards)
ModelALX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushTAATTARATTA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words23663
TF familyPaired-related HD factors {3.1.3}
TF subfamilyALX {3.1.3.1}
HGNCHGNC:450
EntrezGeneGeneID:60529
(SSTAR profile)
UniProt IDALX4_HUMAN
UniProt ACQ9H161
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.47022
0.0005 1.48191
0.0001 5.282775
GTEx tissue expression atlas ALX4 expression
ReMap ChIP-seq dataset list ALX4 datasets
Motifs in JASPAR
PCM
ACGT
013870.9567295.0843216.2468840.919
02112.45637.82723.61523049.307
0323128.3573.97419.44271.432
0423221.6350.3140.9420.314
050.07.9321.25623214.017
067.7341024.68415.89822174.89
0718232.9170.04990.2880.0
0813734.561417.8659046.75124.028
0922119.166212.188685.513206.338
1061.32684.29757.98823019.594
11357.555231.86289.80822543.98
1222765.935114.877126.148216.245
PWM
ACGT
01-0.4050.228-0.590.42
02-3.922-4.97-5.4041.378
031.382-6.797-5.578-4.364
041.386-7.628-7.427-7.628
05-7.745-6.321-7.341.386
06-6.34-1.732-5.7541.34
071.144-7.745-0.151-7.745
080.861-2.6260.443-5.388
091.337-3.298-2.133-3.325
10-4.511-4.203-4.5641.377
11-2.781-3.21-4.1421.356
121.366-3.902-3.81-3.279