We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAr
ModelANDR_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnRGdACWbTbTGTbCYbn
Best auROC (human)0.976
Best auROC (mouse)0.995
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words512
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyGR-like receptors (NR3C) {2.1.1.1}
MGIMGI:88064
EntrezGeneGeneID:11835
(SSTAR profile)
UniProt IDANDR_MOUSE
UniProt ACP19091
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.150010000000002
0.0005 10.24426
0.0001 14.64576
GTEx tissue expression atlas Ar expression
Motifs in JASPAR
MA0007.1 (Ar; Rattus rattus)
MA0007.2 (AR; Homo sapiens)
MA0007.3 (Ar; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0168.03.098.04.091.07.011.09.052.03.069.08.018.00.053.06.0
0214.02.0209.04.04.01.08.00.012.01.0207.011.00.01.024.02.0
0310.07.08.05.01.00.00.04.0194.058.0103.093.06.03.04.04.0
04182.09.010.010.055.06.00.07.097.011.02.05.086.06.06.08.0
055.0386.020.09.02.025.02.03.00.017.01.00.00.026.02.02.0
064.01.02.00.0338.017.029.070.07.03.011.04.02.03.02.07.0
0718.0127.0104.0102.03.010.00.011.05.018.07.014.05.029.024.023.0
080.018.00.013.00.068.00.0116.00.057.00.078.00.058.00.092.0
090.00.00.00.047.072.041.041.00.00.00.00.021.0106.0125.047.0
105.08.02.053.021.013.00.0144.011.09.05.0141.04.07.02.075.0
110.00.041.00.03.03.030.01.00.00.09.00.04.02.0406.01.0
120.00.00.07.00.01.00.04.022.08.09.0447.00.00.00.02.0
135.05.04.08.01.03.00.05.01.04.01.03.062.0110.066.0222.0
144.061.00.04.02.0110.01.09.08.059.00.04.01.0226.00.011.0
150.012.01.02.034.0217.02.0203.00.00.00.01.04.019.01.04.0
163.011.015.09.038.089.011.0110.00.00.03.01.023.066.050.071.0
1710.07.032.015.075.018.012.061.019.019.016.025.022.042.069.058.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.771-2.2341.135-1.9751.061-1.454-1.022-1.2150.504-2.2340.785-1.328-0.543-4.40.523-1.6
02-0.788-2.5841.89-1.975-1.975-3.126-1.328-4.4-0.938-3.1261.88-1.022-4.4-3.126-0.26-2.584
03-1.114-1.454-1.328-1.77-3.126-4.4-4.4-1.9751.8150.6131.1841.082-1.6-2.234-1.975-1.975
041.752-1.215-1.114-1.1140.56-1.6-4.4-1.4541.124-1.022-2.584-1.771.004-1.6-1.6-1.328
05-1.772.502-0.439-1.215-2.584-0.22-2.584-2.234-4.4-0.599-3.126-4.4-4.4-0.181-2.584-2.584
06-1.975-3.126-2.584-4.42.37-0.599-0.0740.8-1.454-2.234-1.022-1.975-2.584-2.234-2.584-1.454
07-0.5431.3931.1941.174-2.234-1.114-4.4-1.022-1.77-0.543-1.454-0.788-1.77-0.074-0.26-0.302
08-4.4-0.543-4.4-0.86-4.40.771-4.41.303-4.40.595-4.40.907-4.40.613-4.41.072
09-4.4-4.4-4.4-4.40.4040.8280.2690.269-4.4-4.4-4.4-4.4-0.3921.2131.3770.404
10-1.77-1.328-2.5840.523-0.392-0.86-4.41.518-1.022-1.215-1.771.497-1.975-1.454-2.5840.868
11-4.4-4.40.269-4.4-2.234-2.234-0.04-3.126-4.4-4.4-1.215-4.4-1.975-2.5842.553-3.126
12-4.4-4.4-4.4-1.454-4.4-3.126-4.4-1.975-0.346-1.328-1.2152.649-4.4-4.4-4.4-2.584
13-1.77-1.77-1.975-1.328-3.126-2.234-4.4-1.77-3.126-1.975-3.126-2.2340.6791.250.7411.95
14-1.9750.663-4.4-1.975-2.5841.25-3.126-1.215-1.3280.63-4.4-1.975-3.1261.968-4.4-1.022
15-4.4-0.938-3.126-2.5840.0831.927-2.5841.861-4.4-4.4-4.4-3.126-1.975-0.49-3.126-1.975
16-2.234-1.022-0.721-1.2150.1931.039-1.0221.25-4.4-4.4-2.234-3.126-0.3020.7410.4650.814
17-1.114-1.4540.023-0.7210.868-0.543-0.9380.663-0.49-0.49-0.658-0.22-0.3460.2930.7850.613