We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAr
ModelANDR_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusRGvACAbTvTGTbCYb
Best auROC (human)0.967
Best auROC (mouse)0.995
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words500
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyGR-like receptors (NR3C) {2.1.1.1}
MGIMGI:88064
EntrezGeneGeneID:11835
(SSTAR profile)
UniProt IDANDR_MOUSE
UniProt ACP19091
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.1922099999999998
0.0005 4.38466
0.0001 6.864560000000001
GTEx tissue expression atlas Ar expression
Motifs in JASPAR
MA0007.1 (Ar; Rattus rattus)
MA0007.2 (AR; Homo sapiens)
MA0007.3 (Ar; Mus musculus)
PCM
ACGT
01201.08.0260.031.0
0213.02.0472.013.0
03226.096.0107.071.0
04451.09.013.027.0
050.0481.013.06.0
06408.08.047.037.0
0728.0205.0132.0135.0
080.0189.00.0311.0
0964.0192.0185.059.0
1042.028.06.0424.0
112.05.0493.00.0
1212.013.09.0466.0
1374.0106.0103.0217.0
1416.0467.02.015.0
1527.0267.02.0204.0
1668.0155.096.0181.0
PWM
ACGT
010.47-2.5840.726-1.358
02-2.163-3.5731.32-2.163
030.587-0.26-0.153-0.556
041.274-2.484-2.163-1.489
05-4.41.338-2.163-2.819
061.174-2.584-0.958-1.189
07-1.4540.490.0540.076
08-4.40.409-4.40.904
09-0.6580.4250.388-0.737
10-1.067-1.454-2.8191.213
11-3.573-2.9611.363-4.4
12-2.234-2.163-2.4841.307
13-0.516-0.163-0.1910.546
14-1.9751.309-3.573-2.034
15-1.4890.752-3.5730.485
16-0.5990.213-0.260.366