Model info
| Transcription factor | Ar | ||||||||
| Model | ANDR_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RGvACAbTvTGTbCYb | ||||||||
| Best auROC (human) | 0.967 | ||||||||
| Best auROC (mouse) | 0.995 | ||||||||
| Peak sets in benchmark (human) | 461 | ||||||||
| Peak sets in benchmark (mouse) | 57 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C) {2.1.1.1} | ||||||||
| MGI | MGI:88064 | ||||||||
| EntrezGene | GeneID:11835 (SSTAR profile) | ||||||||
| UniProt ID | ANDR_MOUSE | ||||||||
| UniProt AC | P19091 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Ar expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 201.0 | 8.0 | 260.0 | 31.0 |
| 02 | 13.0 | 2.0 | 472.0 | 13.0 |
| 03 | 226.0 | 96.0 | 107.0 | 71.0 |
| 04 | 451.0 | 9.0 | 13.0 | 27.0 |
| 05 | 0.0 | 481.0 | 13.0 | 6.0 |
| 06 | 408.0 | 8.0 | 47.0 | 37.0 |
| 07 | 28.0 | 205.0 | 132.0 | 135.0 |
| 08 | 0.0 | 189.0 | 0.0 | 311.0 |
| 09 | 64.0 | 192.0 | 185.0 | 59.0 |
| 10 | 42.0 | 28.0 | 6.0 | 424.0 |
| 11 | 2.0 | 5.0 | 493.0 | 0.0 |
| 12 | 12.0 | 13.0 | 9.0 | 466.0 |
| 13 | 74.0 | 106.0 | 103.0 | 217.0 |
| 14 | 16.0 | 467.0 | 2.0 | 15.0 |
| 15 | 27.0 | 267.0 | 2.0 | 204.0 |
| 16 | 68.0 | 155.0 | 96.0 | 181.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.47 | -2.584 | 0.726 | -1.358 |
| 02 | -2.163 | -3.573 | 1.32 | -2.163 |
| 03 | 0.587 | -0.26 | -0.153 | -0.556 |
| 04 | 1.274 | -2.484 | -2.163 | -1.489 |
| 05 | -4.4 | 1.338 | -2.163 | -2.819 |
| 06 | 1.174 | -2.584 | -0.958 | -1.189 |
| 07 | -1.454 | 0.49 | 0.054 | 0.076 |
| 08 | -4.4 | 0.409 | -4.4 | 0.904 |
| 09 | -0.658 | 0.425 | 0.388 | -0.737 |
| 10 | -1.067 | -1.454 | -2.819 | 1.213 |
| 11 | -3.573 | -2.961 | 1.363 | -4.4 |
| 12 | -2.234 | -2.163 | -2.484 | 1.307 |
| 13 | -0.516 | -0.163 | -0.191 | 0.546 |
| 14 | -1.975 | 1.309 | -3.573 | -2.034 |
| 15 | -1.489 | 0.752 | -3.573 | 0.485 |
| 16 | -0.599 | 0.213 | -0.26 | 0.366 |