Model info
| Transcription factor | Ar | ||||||||
| Model | ANDR_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dbYbTGTbCYbd | ||||||||
| Best auROC (human) | 0.897 | ||||||||
| Best auROC (mouse) | 0.929 | ||||||||
| Peak sets in benchmark (human) | 461 | ||||||||
| Peak sets in benchmark (mouse) | 57 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C) {2.1.1.1} | ||||||||
| MGI | MGI:88064 | ||||||||
| EntrezGene | GeneID:11835 (SSTAR profile) | ||||||||
| UniProt ID | ANDR_MOUSE | ||||||||
| UniProt AC | P19091 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Ar expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 254.0 | 40.0 | 54.0 | 152.0 |
| 02 | 41.0 | 215.0 | 162.0 | 82.0 |
| 03 | 91.0 | 116.0 | 17.0 | 276.0 |
| 04 | 36.0 | 174.0 | 183.0 | 107.0 |
| 05 | 13.0 | 11.0 | 2.0 | 474.0 |
| 06 | 1.0 | 1.0 | 492.0 | 6.0 |
| 07 | 4.0 | 0.0 | 3.0 | 493.0 |
| 08 | 34.0 | 118.0 | 86.0 | 262.0 |
| 09 | 1.0 | 487.0 | 0.0 | 12.0 |
| 10 | 26.0 | 183.0 | 4.0 | 287.0 |
| 11 | 38.0 | 100.0 | 106.0 | 256.0 |
| 12 | 83.0 | 80.0 | 154.0 | 183.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.703 | -1.114 | -0.823 | 0.193 |
| 02 | -1.09 | 0.537 | 0.256 | -0.415 |
| 03 | -0.313 | -0.074 | -1.92 | 0.785 |
| 04 | -1.215 | 0.327 | 0.377 | -0.153 |
| 05 | -2.163 | -2.311 | -3.573 | 1.324 |
| 06 | -3.903 | -3.903 | 1.361 | -2.819 |
| 07 | -3.126 | -4.4 | -3.325 | 1.363 |
| 08 | -1.27 | -0.057 | -0.368 | 0.734 |
| 09 | -3.903 | 1.351 | -4.4 | -2.234 |
| 10 | -1.525 | 0.377 | -3.126 | 0.824 |
| 11 | -1.163 | -0.22 | -0.163 | 0.711 |
| 12 | -0.403 | -0.439 | 0.206 | 0.377 |