We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTFAP2C
(GeneCards)
ModelAP2C_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnndSCCYGRGGShnndn
Best auROC (human)0.964
Best auROC (mouse)0.959
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)6
Aligned words497
TF familyAP-2 {1.3.1}
TF subfamilyAP-2gamma {1.3.1.0.3}
HGNCHGNC:11744
EntrezGeneGeneID:7022
(SSTAR profile)
UniProt IDAP2C_HUMAN
UniProt ACQ92754
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.060960000000001
0.0005 9.434560000000001
0.0001 14.33371
GTEx tissue expression atlas TFAP2C expression
ReMap ChIP-seq dataset list TFAP2C datasets
Motifs in JASPAR
MA0524.1 (TFAP2C; Homo sapiens)
MA0524.2 (TFAP2C; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.029.036.067.033.023.07.065.021.020.028.060.08.014.015.038.0
0212.06.055.021.031.012.04.039.012.018.036.020.048.028.0123.031.0
032.031.066.04.02.027.033.02.08.0152.052.06.02.028.078.03.0
040.014.00.00.01.0237.00.00.00.0229.00.00.00.015.00.00.0
050.01.00.00.01.0466.00.028.00.00.00.00.00.00.00.00.0
061.00.00.00.019.075.015.0358.00.00.00.00.00.01.09.018.0
070.01.019.00.00.00.069.07.00.00.022.02.05.00.0340.031.0
080.01.04.00.00.00.00.01.0238.025.0187.00.025.01.014.00.0
0914.02.0246.01.03.00.024.00.037.00.0167.01.00.00.01.00.0
100.00.054.00.00.00.02.00.00.02.0435.01.01.00.01.00.0
110.00.01.00.01.01.00.00.017.0302.0159.014.00.00.01.00.0
123.04.04.07.086.069.043.0105.022.096.012.031.03.01.04.06.0
1353.018.029.014.095.023.013.039.019.017.014.013.059.017.064.09.0
1438.044.068.076.018.024.02.031.025.021.035.039.07.018.027.023.0
1524.07.037.020.033.014.020.040.036.014.045.037.015.019.072.063.0
1618.019.049.022.014.020.04.016.021.051.072.030.017.042.048.053.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.031-0.0660.1480.7640.062-0.294-1.4470.734-0.384-0.431-0.10.654-1.32-0.78-0.7130.201
02-0.93-1.5920.568-0.3840.0-0.93-1.9680.227-0.93-0.5350.148-0.4310.433-0.11.3690.0
03-2.5760.00.749-1.968-2.576-0.1360.062-2.576-1.321.580.512-1.592-2.576-0.10.915-2.226
04-4.393-0.78-4.393-4.393-3.1192.023-4.393-4.393-4.3931.989-4.393-4.393-4.393-0.713-4.393-4.393
05-4.393-3.119-4.393-4.393-3.1192.699-4.393-0.1-4.393-4.393-4.393-4.393-4.393-4.393-4.393-4.393
06-3.119-4.393-4.393-4.393-0.4820.876-0.7132.435-4.393-4.393-4.393-4.393-4.393-3.119-1.207-0.535
07-4.393-3.119-0.482-4.393-4.393-4.3930.793-1.447-4.393-4.393-0.338-2.576-1.762-4.3932.3840.0
08-4.393-3.119-1.968-4.393-4.393-4.393-4.393-3.1192.027-0.2121.787-4.393-0.212-3.119-0.78-4.393
09-0.78-2.5762.06-3.119-2.226-4.393-0.252-4.3930.175-4.3931.674-3.119-4.393-4.393-3.119-4.393
10-4.393-4.3930.55-4.393-4.393-4.393-2.576-4.393-4.393-2.5762.63-3.119-3.119-4.393-3.119-4.393
11-4.393-4.393-3.119-4.393-3.119-3.119-4.393-4.393-0.5912.2651.625-0.78-4.393-4.393-3.119-4.393
12-2.226-1.968-1.968-1.4471.0120.7930.3241.211-0.3381.122-0.930.0-2.226-3.119-1.968-1.592
130.531-0.535-0.066-0.781.112-0.294-0.8520.227-0.482-0.591-0.78-0.8520.638-0.5910.719-1.207
140.2010.3470.7790.889-0.535-0.252-2.5760.0-0.212-0.3840.120.227-1.447-0.535-0.136-0.294
15-0.252-1.4470.175-0.4310.062-0.78-0.4310.2520.148-0.780.3690.175-0.713-0.4820.8360.703
16-0.535-0.4820.453-0.338-0.78-0.431-1.968-0.65-0.3840.4930.836-0.032-0.5910.30.4330.531