Model info
| Transcription factor | TFAP2C (GeneCards) | ||||||||
| Model | AP2C_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vddSCCTGRGGShv | ||||||||
| Best auROC (human) | 0.95 | ||||||||
| Best auROC (mouse) | 0.941 | ||||||||
| Peak sets in benchmark (human) | 18 | ||||||||
| Peak sets in benchmark (mouse) | 6 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | AP-2 {1.3.1} | ||||||||
| TF subfamily | AP-2gamma {1.3.1.0.3} | ||||||||
| HGNC | HGNC:11744 | ||||||||
| EntrezGene | GeneID:7022 (SSTAR profile) | ||||||||
| UniProt ID | AP2C_HUMAN | ||||||||
| UniProt AC | Q92754 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TFAP2C expression | ||||||||
| ReMap ChIP-seq dataset list | TFAP2C datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 193.614 | 100.515 | 134.783 | 71.088 |
| 02 | 98.037 | 61.799 | 83.2 | 256.963 |
| 03 | 92.298 | 49.886 | 259.215 | 98.601 |
| 04 | 4.767 | 253.52 | 235.946 | 5.767 |
| 05 | 1.902 | 494.142 | 3.957 | 0.0 |
| 06 | 0.934 | 475.911 | 1.172 | 21.982 |
| 07 | 25.008 | 65.933 | 12.689 | 396.371 |
| 08 | 17.682 | 0.0 | 458.604 | 23.714 |
| 09 | 277.519 | 12.699 | 207.919 | 1.863 |
| 10 | 36.72 | 0.0 | 462.294 | 0.985 |
| 11 | 0.0 | 0.0 | 499.058 | 0.942 |
| 12 | 14.466 | 309.124 | 170.509 | 5.902 |
| 13 | 156.963 | 175.77 | 48.576 | 118.691 |
| 14 | 214.138 | 85.26 | 120.834 | 79.768 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.433 | -0.215 | 0.074 | -0.555 |
| 02 | -0.24 | -0.692 | -0.401 | 0.714 |
| 03 | -0.299 | -0.9 | 0.723 | -0.234 |
| 04 | -2.997 | 0.701 | 0.63 | -2.85 |
| 05 | -3.601 | 1.365 | -3.134 | -4.4 |
| 06 | -3.929 | 1.328 | -3.838 | -1.682 |
| 07 | -1.561 | -0.629 | -2.184 | 1.146 |
| 08 | -1.884 | -4.4 | 1.291 | -1.611 |
| 09 | 0.791 | -2.184 | 0.504 | -3.612 |
| 10 | -1.196 | -4.4 | 1.299 | -3.909 |
| 11 | -4.4 | -4.4 | 1.375 | -3.926 |
| 12 | -2.067 | 0.898 | 0.307 | -2.832 |
| 13 | 0.225 | 0.337 | -0.926 | -0.051 |
| 14 | 0.533 | -0.377 | -0.033 | -0.442 |