We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorARNT2
(GeneCards)
ModelARNT2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusRnSGTGGvRSRS
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words18
TF familyPAS domain factors {1.2.5}
TF subfamilyArnt-like factors {1.2.5.2}
HGNCHGNC:16876
EntrezGeneGeneID:9915
(SSTAR profile)
UniProt IDARNT2_HUMAN
UniProt ACQ9HBZ2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.137815
0.0005 4.7582699999999996
0.0001 6.011915
GTEx tissue expression atlas ARNT2 expression
ReMap ChIP-seq dataset list ARNT2 datasets
Motifs in JASPAR
PCM
ACGT
013.4791.49110.5462.485
022.9825.085.9633.975
030.011.9263.9752.098
040.00.99417.0060.0
050.00.00.99417.006
060.00.99417.0060.0
070.9940.015.9021.104
082.9825.9637.0671.988
0910.0490.04.9692.982
100.05.96310.0491.988
117.0670.08.9451.988
122.48510.5463.4791.491
PWM
ACGT
01-0.218-0.8580.769-0.488
02-0.3440.1050.247-0.106
03-1.9780.885-0.106-0.616
04-1.978-1.1131.222-1.978
05-1.978-1.978-1.1131.222
06-1.978-1.1131.222-1.978
07-1.113-1.9781.158-1.05
08-0.3440.2470.4-0.656
090.724-1.9780.086-0.344
10-1.9780.2470.724-0.656
110.4-1.9780.616-0.656
12-0.4880.769-0.218-0.858