We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorArnt
ModelARNT_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
B
Motif rank
0
ConsensusbYACGTGh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words283
TF familyPAS domain factors {1.2.5}
TF subfamilyArnt-like factors {1.2.5.2}
MGIMGI:88071
EntrezGeneGeneID:11863
(SSTAR profile)
UniProt IDARNT_MOUSE
UniProt ACP53762
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.11109
0.0005 2.64396
0.0001 5.40709
GTEx tissue expression atlas Arnt expression
Motifs in JASPAR
PCM
ACGT
0127.55166.00263.374110.872
0212.601139.09116.599.607
03145.5650.0122.2330.0
040.0267.7980.00.0
050.00.0267.7980.0
060.00.00.0267.798
070.00.0267.7980.0
0850.292148.11714.29655.093
PWM
ACGT
01-0.859-0.014-0.0540.496
02-1.5860.721-1.340.391
030.766-3.890.593-3.89
04-3.891.371-3.89-3.89
05-3.89-3.891.371-3.89
06-3.89-3.89-3.891.371
07-3.89-3.891.371-3.89
08-0.2790.783-1.471-0.191