We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorARX
(GeneCards)
ModelARX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensushTAATYTAATTWv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words623
TF familyPaired-related HD factors {3.1.3}
TF subfamilyARX {3.1.3.3}
HGNCHGNC:18060
EntrezGeneGeneID:170302
(SSTAR profile)
UniProt IDARX_HUMAN
UniProt ACQ96QS3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.58586
0.0005 4.95613
0.0001 7.73794
GTEx tissue expression atlas ARX expression
ReMap ChIP-seq dataset list ARX datasets
Motifs in JASPAR
PCM
ACGT
0196.228175.38296.213255.178
0237.20535.86235.191514.742
03601.2083.02110.3928.378
04606.0762.51811.2173.189
052.51849.4293.861567.193
060.168253.04416.252353.536
070.168161.0880.839460.905
08586.940.83934.3810.839
09621.1540.1680.1681.511
100.5040.5040.504621.489
1110.7280.6710.671610.929
12464.69851.42552.09654.782
13194.988103.748230.57393.691
PWM
ACGT
01-0.4750.118-0.4750.49
02-1.4-1.435-1.4531.188
031.343-3.526-2.574-2.757
041.351-3.641-2.507-3.49
05-3.641-1.126-3.3591.285
06-4.4840.481-2.1760.814
07-4.4840.033-4.1631.078
081.319-4.163-1.475-4.163
091.376-4.484-4.484-3.921
10-4.311-4.311-4.3111.376
11-2.546-4.234-4.2341.359
121.086-1.088-1.075-1.026
130.223-0.4010.389-0.502