We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAscl1
ModelASCL1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusnvCAGCTGCYbnbn
Best auROC (human)0.976
Best auROC (mouse)0.993
Peak sets in benchmark (human)30
Peak sets in benchmark (mouse)25
Aligned words342
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyAchaete-Scute-like factors {1.2.2.2}
MGIMGI:96919
EntrezGeneGeneID:17172
(SSTAR profile)
UniProt IDASCL1_MOUSE
UniProt ACQ02067
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.32061
0.0005 6.21227
0.0001 11.852445
GTEx tissue expression atlas Ascl1 expression
Motifs in JASPAR
MA1100.1 (ASCL1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0123.016.016.01.042.039.017.07.032.051.017.01.09.022.045.03.0
020.0106.00.00.00.0128.00.00.00.095.00.00.00.012.00.00.0
030.00.00.00.0341.00.00.00.00.00.00.00.00.00.00.00.0
040.08.0333.00.00.00.00.00.00.00.00.00.00.00.00.00.0
050.00.00.00.00.08.00.00.00.0333.00.00.00.00.00.00.0
060.00.00.00.00.00.00.0341.00.00.00.00.00.00.00.00.0
070.00.00.00.00.00.00.00.00.00.00.00.00.00.0341.00.0
080.00.00.00.00.00.00.00.00.0333.00.08.00.00.00.00.0
090.00.00.00.045.0131.01.0156.00.00.00.00.00.06.00.02.0
101.02.033.09.028.043.09.057.00.01.00.00.010.054.077.017.0
118.09.017.05.026.037.010.027.012.046.043.018.05.026.035.017.0
124.010.023.014.010.035.03.070.016.030.040.019.05.019.019.024.0
138.07.09.011.016.032.016.030.021.026.019.019.015.022.058.032.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.075-0.281-0.281-2.7650.670.597-0.222-1.080.4010.863-0.222-2.765-0.8390.0310.738-1.863
02-4.0861.591-4.086-4.086-4.0861.779-4.086-4.086-4.0861.481-4.086-4.086-4.086-0.561-4.086-4.086
03-4.086-4.086-4.086-4.0862.757-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086
04-4.086-0.9522.733-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086
05-4.086-4.086-4.086-4.086-4.086-0.952-4.086-4.086-4.0862.733-4.086-4.086-4.086-4.086-4.086-4.086
06-4.086-4.086-4.086-4.086-4.086-4.086-4.0862.757-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086
07-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.0862.757-4.086
08-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.086-4.0862.733-4.086-0.952-4.086-4.086-4.086-4.086
09-4.086-4.086-4.086-4.0860.7381.802-2.7651.976-4.086-4.086-4.086-4.086-4.086-1.226-4.086-2.216
10-2.765-2.2160.431-0.8390.2690.693-0.8390.973-4.086-2.765-4.086-4.086-0.7380.9191.272-0.222
11-0.952-0.839-0.222-1.3960.1960.544-0.7380.233-0.5610.760.693-0.166-1.3960.1960.489-0.222
12-1.603-0.7380.075-0.411-0.7380.489-1.8631.177-0.2810.3370.622-0.113-1.396-0.113-0.1130.117
13-0.952-1.08-0.839-0.646-0.2810.401-0.2810.337-0.0150.196-0.113-0.113-0.3440.0310.990.401