Model info
| Transcription factor | Ascl1 | ||||||||
| Model | ASCL1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bhvCASCTGYYbbh | ||||||||
| Best auROC (human) | 0.977 | ||||||||
| Best auROC (mouse) | 0.99 | ||||||||
| Peak sets in benchmark (human) | 30 | ||||||||
| Peak sets in benchmark (mouse) | 25 | ||||||||
| Aligned words | 447 | ||||||||
| TF family | MyoD / ASC-related factors {1.2.2} | ||||||||
| TF subfamily | Achaete-Scute-like factors {1.2.2.2} | ||||||||
| MGI | MGI:96919 | ||||||||
| EntrezGene | GeneID:17172 (SSTAR profile) | ||||||||
| UniProt ID | ASCL1_MOUSE | ||||||||
| UniProt AC | Q02067 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Ascl1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 36.0 | 260.0 | 75.0 | 76.0 |
| 02 | 116.0 | 85.0 | 39.0 | 207.0 |
| 03 | 45.0 | 128.0 | 241.0 | 33.0 |
| 04 | 0.0 | 447.0 | 0.0 | 0.0 |
| 05 | 447.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 195.0 | 247.0 | 5.0 |
| 07 | 0.0 | 443.0 | 0.0 | 4.0 |
| 08 | 0.0 | 0.0 | 1.0 | 446.0 |
| 09 | 0.0 | 1.0 | 446.0 | 0.0 |
| 10 | 10.0 | 355.0 | 37.0 | 45.0 |
| 11 | 50.0 | 209.0 | 0.0 | 188.0 |
| 12 | 27.0 | 157.0 | 144.0 | 119.0 |
| 13 | 47.0 | 226.0 | 62.0 | 112.0 |
| 14 | 72.0 | 171.0 | 63.0 | 141.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.105 | 0.837 | -0.392 | -0.379 |
| 02 | 0.037 | -0.269 | -1.028 | 0.61 |
| 03 | -0.89 | 0.134 | 0.761 | -1.188 |
| 04 | -4.307 | 1.376 | -4.307 | -4.307 |
| 05 | 1.376 | -4.307 | -4.307 | -4.307 |
| 06 | -4.307 | 0.551 | 0.786 | -2.854 |
| 07 | -4.307 | 1.367 | -4.307 | -3.02 |
| 08 | -4.307 | -4.307 | -3.803 | 1.374 |
| 09 | -4.307 | -3.803 | 1.374 | -4.307 |
| 10 | -2.285 | 1.147 | -1.079 | -0.89 |
| 11 | -0.788 | 0.62 | -4.307 | 0.515 |
| 12 | -1.379 | 0.336 | 0.251 | 0.062 |
| 13 | -0.848 | 0.697 | -0.578 | 0.002 |
| 14 | -0.432 | 0.421 | -0.563 | 0.23 |