Check the newest release v13
Model info
Transcription factorASCL2
(GeneCards)
ModelASCL2_HUMAN.H11DI.0.D
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
D
Motif rank
0
ConsensusnvCASCTGCYnbn
Best auROC (human)0.624
Best auROC (mouse)0.933
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)9
Aligned words522
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyAchaete-Scute-like factors {1.2.2.2}
HGNCHGNC:739
EntrezGeneGeneID:430
(SSTAR profile)
UniProt IDASCL2_HUMAN
UniProt ACQ99929
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.257975
0.0005 9.471810000000001
0.0001 14.668375000000001
GTEx tissue expression atlas ASCL2 expression
ReMap ChIP-seq dataset list ASCL2 datasets
Motifs in JASPAR
MA0816.1 (Ascl2; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0134.029.050.01.054.028.027.07.033.063.037.010.016.043.067.01.0
022.0133.01.01.00.0163.00.00.00.0180.01.00.00.017.02.00.0
030.01.00.01.0485.04.01.03.03.00.00.01.01.00.00.00.0
042.0177.0271.039.00.02.01.02.00.00.01.00.00.01.03.01.0
051.01.00.00.05.0172.02.01.01.0275.00.00.01.039.00.02.0
060.00.00.08.00.01.00.0486.00.00.00.02.00.00.01.02.0
070.00.00.00.00.00.01.00.00.00.01.00.01.03.0482.012.0
080.00.01.00.00.02.00.01.05.0411.02.066.00.04.00.08.0
092.00.00.03.022.0117.02.0276.00.00.00.03.01.031.04.039.0
102.013.09.01.048.027.019.054.01.03.02.00.022.083.0136.080.0
111.037.019.016.019.054.03.050.04.081.033.048.01.075.034.025.0
123.07.011.04.072.093.014.068.023.024.024.018.013.046.044.036.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.083-0.0740.465-3.1260.542-0.108-0.144-1.4540.0540.6950.167-1.114-0.6580.3160.756-3.126
02-2.5841.439-3.126-3.126-4.41.642-4.4-4.4-4.41.741-3.126-4.4-4.4-0.599-2.584-4.4
03-4.4-3.126-4.4-3.1262.731-1.975-3.126-2.234-2.234-4.4-4.4-3.126-3.126-4.4-4.4-4.4
04-2.5841.7242.1490.219-4.4-2.584-3.126-2.584-4.4-4.4-3.126-4.4-4.4-3.126-2.234-3.126
05-3.126-3.126-4.4-4.4-1.771.695-2.584-3.126-3.1262.164-4.4-4.4-3.1260.219-4.4-2.584
06-4.4-4.4-4.4-1.328-4.4-3.126-4.42.733-4.4-4.4-4.4-2.584-4.4-4.4-3.126-2.584
07-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-3.126-4.4-3.126-2.2342.724-0.938
08-4.4-4.4-3.126-4.4-4.4-2.584-4.4-3.126-1.772.565-2.5840.741-4.4-1.975-4.4-1.328
09-2.584-4.4-4.4-2.234-0.3461.311-2.5842.167-4.4-4.4-4.4-2.234-3.126-0.008-1.9750.219
10-2.584-0.86-1.215-3.1260.425-0.144-0.490.542-3.126-2.234-2.584-4.4-0.3460.9691.4610.932
11-3.1260.167-0.49-0.658-0.490.542-2.2340.465-1.9750.9450.0540.425-3.1260.8680.083-0.22
12-2.234-1.454-1.022-1.9750.8281.082-0.7880.771-0.302-0.26-0.26-0.543-0.860.3830.3390.14