We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAscl2
ModelASCL2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusnvCASCTGCYnbn
Best auROC (human)0.624
Best auROC (mouse)0.933
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)9
Aligned words522
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyAchaete-Scute-like factors {1.2.2.2}
MGIMGI:96920
EntrezGeneGeneID:17173
(SSTAR profile)
UniProt IDASCL2_MOUSE
UniProt ACO35885
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.49272
0.0005 9.695060000000002
0.0001 14.966505
GTEx tissue expression atlas Ascl2 expression
Motifs in JASPAR
MA0816.1 (Ascl2; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0134.029.050.01.054.028.027.07.033.063.037.010.016.043.067.01.0
022.0133.01.01.00.0163.00.00.00.0180.01.00.00.017.02.00.0
030.01.00.01.0485.04.01.03.03.00.00.01.01.00.00.00.0
042.0177.0271.039.00.02.01.02.00.00.01.00.00.01.03.01.0
051.01.00.00.05.0172.02.01.01.0275.00.00.01.039.00.02.0
060.00.00.08.00.01.00.0486.00.00.00.02.00.00.01.02.0
070.00.00.00.00.00.01.00.00.00.01.00.01.03.0482.012.0
080.00.01.00.00.02.00.01.05.0411.02.066.00.04.00.08.0
092.00.00.03.022.0117.02.0276.00.00.00.03.01.031.04.039.0
102.013.09.01.048.027.019.054.01.03.02.00.022.083.0136.080.0
111.037.019.016.019.054.03.050.04.081.033.048.01.075.034.025.0
123.07.011.04.072.093.014.068.023.024.024.018.013.046.044.036.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.083-0.0740.465-3.1260.542-0.108-0.144-1.4540.0540.6950.167-1.114-0.6580.3160.756-3.126
02-2.5841.439-3.126-3.126-4.41.642-4.4-4.4-4.41.741-3.126-4.4-4.4-0.599-2.584-4.4
03-4.4-3.126-4.4-3.1262.731-1.975-3.126-2.234-2.234-4.4-4.4-3.126-3.126-4.4-4.4-4.4
04-2.5841.7242.1490.219-4.4-2.584-3.126-2.584-4.4-4.4-3.126-4.4-4.4-3.126-2.234-3.126
05-3.126-3.126-4.4-4.4-1.771.695-2.584-3.126-3.1262.164-4.4-4.4-3.1260.219-4.4-2.584
06-4.4-4.4-4.4-1.328-4.4-3.126-4.42.733-4.4-4.4-4.4-2.584-4.4-4.4-3.126-2.584
07-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-3.126-4.4-3.126-2.2342.724-0.938
08-4.4-4.4-3.126-4.4-4.4-2.584-4.4-3.126-1.772.565-2.5840.741-4.4-1.975-4.4-1.328
09-2.584-4.4-4.4-2.234-0.3461.311-2.5842.167-4.4-4.4-4.4-2.234-3.126-0.008-1.9750.219
10-2.584-0.86-1.215-3.1260.425-0.144-0.490.542-3.126-2.234-2.584-4.4-0.3460.9691.4610.932
11-3.1260.167-0.49-0.658-0.490.542-2.2340.465-1.9750.9450.0540.425-3.1260.8680.083-0.22
12-2.234-1.454-1.022-1.9750.8281.082-0.7880.771-0.302-0.26-0.26-0.543-0.860.3830.3390.14