We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorATF2
(GeneCards)
ModelATF2_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusnnnRRTGAbRYMRn
Best auROC (human)0.771
Best auROC (mouse)0.874
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words504
TF familyJun-related factors {1.1.1}
TF subfamilyATF-2-like factors {1.1.1.3}
HGNCHGNC:784
EntrezGeneGeneID:1386
(SSTAR profile)
UniProt IDATF2_HUMAN
UniProt ACP15336
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.49786
0.0005 11.113109999999999
0.0001 14.21606
GTEx tissue expression atlas ATF2 expression
ReMap ChIP-seq dataset list ATF2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0136.031.077.06.031.029.035.015.050.038.056.011.014.033.035.03.0
0242.023.035.031.026.026.022.057.042.066.051.044.08.010.014.03.0
0343.00.064.011.051.07.047.020.035.08.070.09.023.01.0106.05.0
0474.02.076.00.011.00.04.01.0168.014.0105.00.018.00.027.00.0
054.00.01.0266.00.00.00.016.02.00.00.0210.00.00.00.01.0
060.00.06.00.00.00.00.00.00.00.01.00.02.04.0484.03.0
072.00.00.00.03.01.00.00.0470.00.01.020.03.00.00.00.0
0831.0283.081.083.00.01.00.00.00.00.01.00.01.05.07.07.0
0910.03.019.00.038.030.0176.045.016.015.053.05.010.04.069.07.0
1011.05.06.052.06.01.01.044.033.042.010.0232.011.031.06.09.0
1135.013.013.00.061.012.04.02.04.013.05.01.069.0241.017.010.0
12102.010.039.018.0249.06.09.015.020.06.08.05.06.03.02.02.0
1337.097.0135.0108.012.04.04.05.019.020.011.08.05.09.021.05.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.14-0.0080.894-1.6-0.008-0.0740.112-0.7210.4650.1930.578-1.022-0.7880.0540.112-2.234
020.293-0.3020.112-0.008-0.181-0.181-0.3460.5950.2930.7410.4850.339-1.328-1.114-0.788-2.234
030.316-4.40.711-1.0220.485-1.4540.404-0.4390.112-1.3280.8-1.215-0.302-3.1261.213-1.77
040.855-2.5840.881-4.4-1.022-4.4-1.975-3.1261.672-0.7881.203-4.4-0.543-4.4-0.144-4.4
05-1.975-4.4-3.1262.131-4.4-4.4-4.4-0.658-2.584-4.4-4.41.895-4.4-4.4-4.4-3.126
06-4.4-4.4-1.6-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-2.584-1.9752.729-2.234
07-2.584-4.4-4.4-4.4-2.234-3.126-4.4-4.42.699-4.4-3.126-0.439-2.234-4.4-4.4-4.4
08-0.0082.1920.9450.969-4.4-3.126-4.4-4.4-4.4-4.4-3.126-4.4-3.126-1.77-1.454-1.454
09-1.114-2.234-0.49-4.40.193-0.041.7180.361-0.658-0.7210.523-1.77-1.114-1.9750.785-1.454
10-1.022-1.77-1.60.504-1.6-3.126-3.1260.3390.0540.293-1.1141.994-1.022-0.008-1.6-1.215
110.112-0.86-0.86-4.40.663-0.938-1.975-2.584-1.975-0.86-1.77-3.1260.7852.032-0.599-1.114
121.174-1.1140.219-0.5432.065-1.6-1.215-0.721-0.439-1.6-1.328-1.77-1.6-2.234-2.584-2.584
130.1671.1241.4541.231-0.938-1.975-1.975-1.77-0.49-0.439-1.022-1.328-1.77-1.215-0.392-1.77