Check the newest release v13
Model info
Transcription factorATF2
(GeneCards)
ModelATF2_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusnnnRRTGAbRYMRn
Best auROC (human)0.771
Best auROC (mouse)0.874
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words504
TF familyJun-related factors {1.1.1}
TF subfamilyATF-2-like factors {1.1.1.3}
HGNCHGNC:784
EntrezGeneGeneID:1386
(SSTAR profile)
UniProt IDATF2_HUMAN
UniProt ACP15336
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.49786
0.0005 11.113109999999999
0.0001 14.21606
GTEx tissue expression atlas ATF2 expression
ReMap ChIP-seq dataset list ATF2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0136.031.077.06.031.029.035.015.050.038.056.011.014.033.035.03.0
0242.023.035.031.026.026.022.057.042.066.051.044.08.010.014.03.0
0343.00.064.011.051.07.047.020.035.08.070.09.023.01.0106.05.0
0474.02.076.00.011.00.04.01.0168.014.0105.00.018.00.027.00.0
054.00.01.0266.00.00.00.016.02.00.00.0210.00.00.00.01.0
060.00.06.00.00.00.00.00.00.00.01.00.02.04.0484.03.0
072.00.00.00.03.01.00.00.0470.00.01.020.03.00.00.00.0
0831.0283.081.083.00.01.00.00.00.00.01.00.01.05.07.07.0
0910.03.019.00.038.030.0176.045.016.015.053.05.010.04.069.07.0
1011.05.06.052.06.01.01.044.033.042.010.0232.011.031.06.09.0
1135.013.013.00.061.012.04.02.04.013.05.01.069.0241.017.010.0
12102.010.039.018.0249.06.09.015.020.06.08.05.06.03.02.02.0
1337.097.0135.0108.012.04.04.05.019.020.011.08.05.09.021.05.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.14-0.0080.894-1.6-0.008-0.0740.112-0.7210.4650.1930.578-1.022-0.7880.0540.112-2.234
020.293-0.3020.112-0.008-0.181-0.181-0.3460.5950.2930.7410.4850.339-1.328-1.114-0.788-2.234
030.316-4.40.711-1.0220.485-1.4540.404-0.4390.112-1.3280.8-1.215-0.302-3.1261.213-1.77
040.855-2.5840.881-4.4-1.022-4.4-1.975-3.1261.672-0.7881.203-4.4-0.543-4.4-0.144-4.4
05-1.975-4.4-3.1262.131-4.4-4.4-4.4-0.658-2.584-4.4-4.41.895-4.4-4.4-4.4-3.126
06-4.4-4.4-1.6-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-2.584-1.9752.729-2.234
07-2.584-4.4-4.4-4.4-2.234-3.126-4.4-4.42.699-4.4-3.126-0.439-2.234-4.4-4.4-4.4
08-0.0082.1920.9450.969-4.4-3.126-4.4-4.4-4.4-4.4-3.126-4.4-3.126-1.77-1.454-1.454
09-1.114-2.234-0.49-4.40.193-0.041.7180.361-0.658-0.7210.523-1.77-1.114-1.9750.785-1.454
10-1.022-1.77-1.60.504-1.6-3.126-3.1260.3390.0540.293-1.1141.994-1.022-0.008-1.6-1.215
110.112-0.86-0.86-4.40.663-0.938-1.975-2.584-1.975-0.86-1.77-3.1260.7852.032-0.599-1.114
121.174-1.1140.219-0.5432.065-1.6-1.215-0.721-0.439-1.6-1.328-1.77-1.6-2.234-2.584-2.584
130.1671.1241.4541.231-0.938-1.975-1.975-1.77-0.49-0.439-1.022-1.328-1.77-1.215-0.392-1.77