We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAtf2
ModelATF2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusndRTGAbSWMAbn
Best auROC (human)0.765
Best auROC (mouse)0.855
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words508
TF familyJun-related factors {1.1.1}
TF subfamilyATF-2-like factors {1.1.1.3}
MGIMGI:109349
EntrezGeneGeneID:102641666; 11909
(SSTAR profile)
UniProt IDATF2_MOUSE
UniProt ACP16951
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.27591
0.0005 11.054314999999999
0.0001 14.541725
GTEx tissue expression atlas Atf2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0156.02.046.019.056.08.037.044.040.010.071.024.018.01.061.07.0
0279.07.084.00.09.02.09.01.098.010.0104.03.034.01.059.00.0
0310.06.02.0202.00.00.00.020.07.04.02.0243.00.00.01.03.0
040.02.015.00.00.00.010.00.01.00.04.00.05.04.0459.00.0
056.00.00.00.05.00.00.01.0479.00.04.05.00.00.00.00.0
0619.0247.096.0128.00.00.00.00.03.00.01.00.01.02.02.01.0
073.02.016.02.021.031.0189.08.07.022.065.05.01.04.0116.08.0
0816.06.03.07.013.01.00.045.048.033.05.0300.07.08.00.08.0
0948.031.04.01.019.023.01.05.00.08.00.00.048.0285.015.012.0
1091.03.016.05.0327.05.010.05.08.04.07.01.013.01.03.01.0
1123.068.0113.0235.02.00.01.010.07.09.08.012.03.00.05.04.0
126.013.013.03.024.017.018.018.036.033.035.023.035.093.084.049.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.578-2.5840.383-0.490.578-1.3280.1670.3390.244-1.1140.814-0.26-0.543-3.1260.663-1.454
020.92-1.4540.981-4.4-1.215-2.584-1.215-3.1261.135-1.1141.194-2.2340.083-3.1260.63-4.4
03-1.114-1.6-2.5841.856-4.4-4.4-4.4-0.439-1.454-1.975-2.5842.04-4.4-4.4-3.126-2.234
04-4.4-2.584-0.721-4.4-4.4-4.4-1.114-4.4-3.126-4.4-1.975-4.4-1.77-1.9752.676-4.4
05-1.6-4.4-4.4-4.4-1.77-4.4-4.4-3.1262.718-4.4-1.975-1.77-4.4-4.4-4.4-4.4
06-0.492.0571.1141.401-4.4-4.4-4.4-4.4-2.234-4.4-3.126-4.4-3.126-2.584-2.584-3.126
07-2.234-2.584-0.658-2.584-0.392-0.0081.789-1.328-1.454-0.3460.726-1.77-3.126-1.9751.303-1.328
08-0.658-1.6-2.234-1.454-0.86-3.126-4.40.3610.4250.054-1.772.251-1.454-1.328-4.4-1.328
090.425-0.008-1.975-3.126-0.49-0.302-3.126-1.77-4.4-1.328-4.4-4.40.4252.199-0.721-0.938
101.061-2.234-0.658-1.772.337-1.77-1.114-1.77-1.328-1.975-1.454-3.126-0.86-3.126-2.234-3.126
11-0.3020.7711.2762.007-2.584-4.4-3.126-1.114-1.454-1.215-1.328-0.938-2.234-4.4-1.77-1.975
12-1.6-0.86-0.86-2.234-0.26-0.599-0.543-0.5430.140.0540.112-0.3020.1121.0820.9810.445