We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorATF3
(GeneCards)
ModelATF3_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnvGTSACGTRRb
Best auROC (human)0.935
Best auROC (mouse)0.746
Peak sets in benchmark (human)36
Peak sets in benchmark (mouse)16
Aligned words507
TF familyFos-related factors {1.1.2}
TF subfamilyATF-3-like factors {1.1.2.2}
HGNCHGNC:785
EntrezGeneGeneID:467
(SSTAR profile)
UniProt IDATF3_HUMAN
UniProt ACP18847
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.185065
0.0005 8.895029999999998
0.0001 12.327435
GTEx tissue expression atlas ATF3 expression
ReMap ChIP-seq dataset list ATF3 datasets
Motifs in JASPAR
MA0605.1 (Atf3; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0127.04.052.08.041.020.081.025.037.020.074.08.017.010.069.07.0
0227.02.093.00.010.01.043.00.072.03.0198.03.010.00.038.00.0
034.02.00.0113.01.00.00.05.07.04.04.0357.00.00.00.03.0
040.02.010.00.00.06.00.00.00.01.03.00.02.0276.0199.01.0
052.00.00.00.0270.06.09.00.0191.05.03.013.01.00.00.00.0
069.0371.010.074.00.09.01.01.00.06.01.05.03.07.00.03.0
070.00.011.01.019.02.0367.05.00.00.012.00.00.01.080.02.0
080.01.00.018.00.00.00.03.014.096.04.0356.01.00.01.06.0
095.03.07.00.060.06.027.04.01.00.04.00.037.058.0270.018.0
1068.014.016.05.053.05.08.01.0139.044.0114.011.09.03.07.03.0
1119.0103.080.067.012.031.013.010.010.060.047.028.03.02.09.06.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.144-1.9750.504-1.3280.269-0.4390.945-0.220.167-0.4390.855-1.328-0.599-1.1140.785-1.454
02-0.144-2.5841.082-4.4-1.114-3.1260.316-4.40.828-2.2341.836-2.234-1.114-4.40.193-4.4
03-1.975-2.584-4.41.276-3.126-4.4-4.4-1.77-1.454-1.975-1.9752.424-4.4-4.4-4.4-2.234
04-4.4-2.584-1.114-4.4-4.4-1.6-4.4-4.4-4.4-3.126-2.234-4.4-2.5842.1671.841-3.126
05-2.584-4.4-4.4-4.42.145-1.6-1.215-4.41.8-1.77-2.234-0.86-3.126-4.4-4.4-4.4
06-1.2152.463-1.1140.855-4.4-1.215-3.126-3.126-4.4-1.6-3.126-1.77-2.234-1.454-4.4-2.234
07-4.4-4.4-1.022-3.126-0.49-2.5842.452-1.77-4.4-4.4-0.938-4.4-4.4-3.1260.932-2.584
08-4.4-3.126-4.4-0.543-4.4-4.4-4.4-2.234-0.7881.114-1.9752.422-3.126-4.4-3.126-1.6
09-1.77-2.234-1.454-4.40.646-1.6-0.144-1.975-3.126-4.4-1.975-4.40.1670.6132.145-0.543
100.771-0.788-0.658-1.770.523-1.77-1.328-3.1261.4830.3391.285-1.022-1.215-2.234-1.454-2.234
11-0.491.1840.9320.756-0.938-0.008-0.86-1.114-1.1140.6460.404-0.108-2.234-2.584-1.215-1.6