Transcription factor | ATF3 (GeneCards) | ||||||||
Model | ATF3_HUMAN.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 11 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dRTSACGTRRb | ||||||||
Best auROC (human) | 0.928 | ||||||||
Best auROC (mouse) | 0.764 | ||||||||
Peak sets in benchmark (human) | 36 | ||||||||
Peak sets in benchmark (mouse) | 16 | ||||||||
Aligned words | 505 | ||||||||
TF family | Fos-related factors {1.1.2} | ||||||||
TF subfamily | ATF-3-like factors {1.1.2.2} | ||||||||
HGNC | HGNC:785 | ||||||||
EntrezGene | GeneID:467 (SSTAR profile) | ||||||||
UniProt ID | ATF3_HUMAN | ||||||||
UniProt AC | P18847 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ATF3 expression | ||||||||
ReMap ChIP-seq dataset list | ATF3 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 111.0 | 45.0 | 290.0 | 54.0 |
02 | 128.0 | 14.0 | 355.0 | 3.0 |
03 | 9.0 | 21.0 | 4.0 | 466.0 |
04 | 5.0 | 239.0 | 254.0 | 2.0 |
05 | 470.0 | 12.0 | 2.0 | 16.0 |
06 | 1.0 | 407.0 | 21.0 | 71.0 |
07 | 19.0 | 9.0 | 463.0 | 9.0 |
08 | 14.0 | 112.0 | 4.0 | 370.0 |
09 | 133.0 | 82.0 | 268.0 | 17.0 |
10 | 288.0 | 52.0 | 126.0 | 34.0 |
11 | 47.0 | 148.0 | 138.0 | 167.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.117 | -1.0 | 0.835 | -0.823 |
02 | 0.023 | -2.096 | 1.036 | -3.325 |
03 | -2.484 | -1.725 | -3.126 | 1.307 |
04 | -2.961 | 0.642 | 0.703 | -3.573 |
05 | 1.315 | -2.234 | -3.573 | -1.975 |
06 | -3.903 | 1.172 | -1.725 | -0.556 |
07 | -1.818 | -2.484 | 1.3 | -2.484 |
08 | -2.096 | -0.108 | -3.126 | 1.077 |
09 | 0.061 | -0.415 | 0.756 | -1.92 |
10 | 0.828 | -0.86 | 0.008 | -1.27 |
11 | -0.958 | 0.167 | 0.098 | 0.287 |