Model info
| Transcription factor | ATF3 (GeneCards) | ||||||||
| Model | ATF3_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRTSACGTRRb | ||||||||
| Best auROC (human) | 0.928 | ||||||||
| Best auROC (mouse) | 0.764 | ||||||||
| Peak sets in benchmark (human) | 36 | ||||||||
| Peak sets in benchmark (mouse) | 16 | ||||||||
| Aligned words | 505 | ||||||||
| TF family | Fos-related factors {1.1.2} | ||||||||
| TF subfamily | ATF-3-like factors {1.1.2.2} | ||||||||
| HGNC | HGNC:785 | ||||||||
| EntrezGene | GeneID:467 (SSTAR profile) | ||||||||
| UniProt ID | ATF3_HUMAN | ||||||||
| UniProt AC | P18847 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ATF3 expression | ||||||||
| ReMap ChIP-seq dataset list | ATF3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 111.0 | 45.0 | 290.0 | 54.0 |
| 02 | 128.0 | 14.0 | 355.0 | 3.0 |
| 03 | 9.0 | 21.0 | 4.0 | 466.0 |
| 04 | 5.0 | 239.0 | 254.0 | 2.0 |
| 05 | 470.0 | 12.0 | 2.0 | 16.0 |
| 06 | 1.0 | 407.0 | 21.0 | 71.0 |
| 07 | 19.0 | 9.0 | 463.0 | 9.0 |
| 08 | 14.0 | 112.0 | 4.0 | 370.0 |
| 09 | 133.0 | 82.0 | 268.0 | 17.0 |
| 10 | 288.0 | 52.0 | 126.0 | 34.0 |
| 11 | 47.0 | 148.0 | 138.0 | 167.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.117 | -1.0 | 0.835 | -0.823 |
| 02 | 0.023 | -2.096 | 1.036 | -3.325 |
| 03 | -2.484 | -1.725 | -3.126 | 1.307 |
| 04 | -2.961 | 0.642 | 0.703 | -3.573 |
| 05 | 1.315 | -2.234 | -3.573 | -1.975 |
| 06 | -3.903 | 1.172 | -1.725 | -0.556 |
| 07 | -1.818 | -2.484 | 1.3 | -2.484 |
| 08 | -2.096 | -0.108 | -3.126 | 1.077 |
| 09 | 0.061 | -0.415 | 0.756 | -1.92 |
| 10 | 0.828 | -0.86 | 0.008 | -1.27 |
| 11 | -0.958 | 0.167 | 0.098 | 0.287 |