We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorATF3
(GeneCards)
ModelATF3_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdRTSACGTRRb
Best auROC (human)0.928
Best auROC (mouse)0.764
Peak sets in benchmark (human)36
Peak sets in benchmark (mouse)16
Aligned words505
TF familyFos-related factors {1.1.2}
TF subfamilyATF-3-like factors {1.1.2.2}
HGNCHGNC:785
EntrezGeneGeneID:467
(SSTAR profile)
UniProt IDATF3_HUMAN
UniProt ACP18847
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7810750000000004
0.0005 4.589980000000001
0.0001 6.147494999999999
GTEx tissue expression atlas ATF3 expression
ReMap ChIP-seq dataset list ATF3 datasets
Motifs in JASPAR
MA0605.1 (Atf3; Mus musculus)
PCM
ACGT
01111.045.0290.054.0
02128.014.0355.03.0
039.021.04.0466.0
045.0239.0254.02.0
05470.012.02.016.0
061.0407.021.071.0
0719.09.0463.09.0
0814.0112.04.0370.0
09133.082.0268.017.0
10288.052.0126.034.0
1147.0148.0138.0167.0
PWM
ACGT
01-0.117-1.00.835-0.823
020.023-2.0961.036-3.325
03-2.484-1.725-3.1261.307
04-2.9610.6420.703-3.573
051.315-2.234-3.573-1.975
06-3.9031.172-1.725-0.556
07-1.818-2.4841.3-2.484
08-2.096-0.108-3.1261.077
090.061-0.4150.756-1.92
100.828-0.860.008-1.27
11-0.9580.1670.0980.287