Model info
| Transcription factor | Atf3 | ||||||||
| Model | ATF3_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vTGAGTCAb | ||||||||
| Best auROC (human) | 0.905 | ||||||||
| Best auROC (mouse) | 0.887 | ||||||||
| Peak sets in benchmark (human) | 36 | ||||||||
| Peak sets in benchmark (mouse) | 16 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Fos-related factors {1.1.2} | ||||||||
| TF subfamily | ATF-3-like factors {1.1.2.2} | ||||||||
| MGI | MGI:109384 | ||||||||
| EntrezGene | GeneID:11910 (SSTAR profile) | ||||||||
| UniProt ID | ATF3_MOUSE | ||||||||
| UniProt AC | Q60765 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Atf3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 179.0 | 154.0 | 135.0 | 32.0 |
| 02 | 20.0 | 3.0 | 7.0 | 470.0 |
| 03 | 5.0 | 13.0 | 457.0 | 25.0 |
| 04 | 463.0 | 2.0 | 9.0 | 26.0 |
| 05 | 29.0 | 0.0 | 471.0 | 0.0 |
| 06 | 74.0 | 16.0 | 14.0 | 396.0 |
| 07 | 57.0 | 414.0 | 25.0 | 4.0 |
| 08 | 494.0 | 4.0 | 0.0 | 2.0 |
| 09 | 18.0 | 178.0 | 135.0 | 169.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.355 | 0.206 | 0.076 | -1.328 |
| 02 | -1.77 | -3.325 | -2.694 | 1.315 |
| 03 | -2.961 | -2.163 | 1.287 | -1.561 |
| 04 | 1.3 | -3.573 | -2.484 | -1.525 |
| 05 | -1.421 | -4.4 | 1.317 | -4.4 |
| 06 | -0.516 | -1.975 | -2.096 | 1.145 |
| 07 | -0.771 | 1.189 | -1.561 | -3.126 |
| 08 | 1.365 | -3.126 | -4.4 | -3.573 |
| 09 | -1.868 | 0.35 | 0.076 | 0.298 |