We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorATF4
(GeneCards)
ModelATF4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusdddMTGATGCAAYn
Best auROC (human)0.998
Best auROC (mouse)0.961
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words453
TF familyATF-4-related factors {1.1.6}
TF subfamilyATF-4 {1.1.6.0.1}
HGNCHGNC:786
EntrezGeneGeneID:468
(SSTAR profile)
UniProt IDATF4_HUMAN
UniProt ACP18848
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.871560000000001
0.0005 7.50681
0.0001 12.843744999999998
GTEx tissue expression atlas ATF4 expression
ReMap ChIP-seq dataset list ATF4 datasets
Motifs in JASPAR
MA0833.1 (ATF4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0185.07.074.024.028.03.07.017.032.011.028.08.026.011.065.027.0
0246.027.071.027.09.010.05.08.040.032.078.024.013.07.033.023.0
0353.022.032.01.058.016.02.00.090.074.022.01.034.042.06.00.0
040.04.00.0231.01.00.00.0153.00.00.00.062.00.00.00.02.0
050.01.00.00.00.00.04.00.00.00.00.00.00.04.0441.03.0
060.00.00.00.04.00.00.01.0438.01.04.02.02.00.01.00.0
070.016.02.0426.00.00.00.01.01.00.00.04.00.00.02.01.0
080.00.01.00.00.00.016.00.00.00.04.00.00.00.0432.00.0
090.00.00.00.00.00.00.00.037.0377.00.039.00.00.00.00.0
1036.01.00.00.0376.00.00.01.00.00.00.00.036.03.00.00.0
11448.00.00.00.04.00.00.00.00.00.00.00.00.00.01.00.0
1211.0144.046.0251.00.00.00.00.00.01.00.00.00.00.00.00.0
131.03.05.02.055.036.04.050.023.07.06.010.076.078.049.048.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.09-1.3580.953-0.163-0.011-2.138-1.358-0.5010.121-0.925-0.011-1.231-0.084-0.9250.824-0.047
020.48-0.0470.911-0.047-1.118-1.017-1.674-1.2310.3420.1211.005-0.163-0.763-1.3580.151-0.205
030.621-0.2480.121-3.0330.71-0.561-2.489-4.3181.1470.953-0.248-3.0330.1810.39-1.503-4.318
04-4.318-1.879-4.3182.087-3.033-4.318-4.3181.676-4.318-4.318-4.3180.777-4.318-4.318-4.318-2.489
05-4.318-3.033-4.318-4.318-4.318-4.318-1.879-4.318-4.318-4.318-4.318-4.318-4.318-1.8792.733-2.138
06-4.318-4.318-4.318-4.318-1.879-4.318-4.318-3.0332.726-3.033-1.879-2.489-2.489-4.318-3.033-4.318
07-4.318-0.561-2.4892.699-4.318-4.318-4.318-3.033-3.033-4.318-4.318-1.879-4.318-4.318-2.489-3.033
08-4.318-4.318-3.033-4.318-4.318-4.318-0.561-4.318-4.318-4.318-1.879-4.318-4.318-4.3182.713-4.318
09-4.318-4.318-4.318-4.318-4.318-4.318-4.318-4.3180.2642.577-4.3180.317-4.318-4.318-4.318-4.318
100.237-3.033-4.318-4.3182.574-4.318-4.318-3.033-4.318-4.318-4.318-4.3180.237-2.138-4.318-4.318
112.749-4.318-4.318-4.318-1.879-4.318-4.318-4.318-4.318-4.318-4.318-4.318-4.318-4.318-3.033-4.318
12-0.9251.6160.482.17-4.318-4.318-4.318-4.318-4.318-3.033-4.318-4.318-4.318-4.318-4.318-4.318
13-3.033-2.138-1.674-2.4890.6580.237-1.8790.563-0.205-1.358-1.503-1.0170.9791.0050.5430.522