We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorATF4
(GeneCards)
ModelATF4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdnMTGATGCAAY
Best auROC (human)0.998
Best auROC (mouse)0.951
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words500
TF familyATF-4-related factors {1.1.6}
TF subfamilyATF-4 {1.1.6.0.1}
HGNCHGNC:786
EntrezGeneGeneID:468
(SSTAR profile)
UniProt IDATF4_HUMAN
UniProt ACP18848
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.69043
0.0005 4.2463999999999995
0.0001 6.90517
GTEx tissue expression atlas ATF4 expression
ReMap ChIP-seq dataset list ATF4 datasets
Motifs in JASPAR
MA0833.1 (ATF4; Homo sapiens)
PCM
ACGT
01199.032.0191.078.0
02118.093.0197.092.0
03267.0165.068.00.0
041.01.00.0498.0
050.03.0489.08.0
06490.03.05.02.0
070.026.03.0471.0
080.03.0497.00.0
0951.0401.01.047.0
10497.03.00.00.0
11499.00.01.00.0
128.0146.065.0281.0
PWM
ACGT
010.46-1.3280.42-0.464
02-0.057-0.2910.45-0.302
030.7520.275-0.599-4.4
04-3.903-3.903-4.41.373
05-4.4-3.3251.355-2.584
061.357-3.325-2.961-3.573
07-4.4-1.525-3.3251.317
08-4.4-3.3251.371-4.4
09-0.8791.157-3.903-0.958
101.371-3.325-4.4-4.4
111.375-4.4-3.903-4.4
12-2.5840.154-0.6430.803