Check the newest release v13
Model info
Transcription factorATF4
(GeneCards)
ModelATF4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdnMTGATGCAAY
Best auROC (human)0.998
Best auROC (mouse)0.951
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words500
TF familyATF-4-related factors {1.1.6}
TF subfamilyATF-4 {1.1.6.0.1}
HGNCHGNC:786
EntrezGeneGeneID:468
(SSTAR profile)
UniProt IDATF4_HUMAN
UniProt ACP18848
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.69043
0.0005 4.2463999999999995
0.0001 6.90517
GTEx tissue expression atlas ATF4 expression
ReMap ChIP-seq dataset list ATF4 datasets
Motifs in JASPAR
MA0833.1 (ATF4; Homo sapiens)
PCM
ACGT
01199.032.0191.078.0
02118.093.0197.092.0
03267.0165.068.00.0
041.01.00.0498.0
050.03.0489.08.0
06490.03.05.02.0
070.026.03.0471.0
080.03.0497.00.0
0951.0401.01.047.0
10497.03.00.00.0
11499.00.01.00.0
128.0146.065.0281.0
PWM
ACGT
010.46-1.3280.42-0.464
02-0.057-0.2910.45-0.302
030.7520.275-0.599-4.4
04-3.903-3.903-4.41.373
05-4.4-3.3251.355-2.584
061.357-3.325-2.961-3.573
07-4.4-1.525-3.3251.317
08-4.4-3.3251.371-4.4
09-0.8791.157-3.903-0.958
101.371-3.325-4.4-4.4
111.375-4.4-3.903-4.4
12-2.5840.154-0.6430.803