We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorAtf4
ModelATF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdnMTGATGCAAY
Best auROC (human)0.998
Best auROC (mouse)0.955
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words500
TF familyATF-4-related factors {1.1.6}
TF subfamilyATF-4 {1.1.6.0.1}
MGIMGI:88096
EntrezGeneGeneID:11911
(SSTAR profile)
UniProt IDATF4_MOUSE
UniProt ACQ06507
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.466665
0.0005 4.050945
0.0001 6.75737
GTEx tissue expression atlas Atf4 expression
Motifs in JASPAR
MA0833.1 (ATF4; Homo sapiens)
PCM
ACGT
01177.036.0207.080.0
02102.0101.0196.0101.0
03278.0147.075.00.0
040.04.00.0496.0
050.04.0492.04.0
06491.04.02.03.0
072.025.01.0472.0
080.00.0500.00.0
0947.0411.00.042.0
10497.02.01.00.0
11499.00.01.00.0
1214.0156.051.0279.0
PWM
ACGT
010.344-1.2150.5-0.439
02-0.201-0.210.445-0.21
030.7930.16-0.503-4.4
04-4.4-3.126-4.41.369
05-4.4-3.1261.361-3.126
061.359-3.126-3.573-3.325
07-3.573-1.561-3.9031.32
08-4.4-4.41.377-4.4
09-0.9581.182-4.4-1.067
101.371-3.573-3.903-4.4
111.375-4.4-3.903-4.4
12-2.0960.219-0.8790.796