Check the newest release v12
Model info
Transcription factorAtf4
ModelATF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdnMTGATGCAAY
Best auROC (human)0.998
Best auROC (mouse)0.955
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)9
Aligned words500
TF familyATF-4-related factors {1.1.6}
TF subfamilyATF-4 {1.1.6.0.1}
MGIMGI:88096
EntrezGeneGeneID:11911
(SSTAR profile)
UniProt IDATF4_MOUSE
UniProt ACQ06507
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.466665
0.0005 4.050945
0.0001 6.75737
GTEx tissue expression atlas Atf4 expression
Motifs in JASPAR
MA0833.1 (ATF4; Homo sapiens)
PCM
ACGT
01177.036.0207.080.0
02102.0101.0196.0101.0
03278.0147.075.00.0
040.04.00.0496.0
050.04.0492.04.0
06491.04.02.03.0
072.025.01.0472.0
080.00.0500.00.0
0947.0411.00.042.0
10497.02.01.00.0
11499.00.01.00.0
1214.0156.051.0279.0
PWM
ACGT
010.344-1.2150.5-0.439
02-0.201-0.210.445-0.21
030.7930.16-0.503-4.4
04-4.4-3.126-4.41.369
05-4.4-3.1261.361-3.126
061.359-3.126-3.573-3.325
07-3.573-1.561-3.9031.32
08-4.4-4.41.377-4.4
09-0.9581.182-4.4-1.067
101.371-3.573-3.903-4.4
111.375-4.4-3.903-4.4
12-2.0960.219-0.8790.796