Model info
| Transcription factor | ATF6 (GeneCards) | ||||||||
| Model | ATF6A_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 12 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vKSSTGACGTGG | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 20 | ||||||||
| TF family | CREB-related factors {1.1.7} | ||||||||
| TF subfamily | ATF-6 factors {1.1.7.3} | ||||||||
| HGNC | HGNC:791 | ||||||||
| EntrezGene | GeneID:22926 (SSTAR profile) | ||||||||
| UniProt ID | ATF6A_HUMAN | ||||||||
| UniProt AC | P18850 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ATF6 expression | ||||||||
| ReMap ChIP-seq dataset list | ATF6 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.692 | 3.692 | 11.692 | 0.923 |
| 02 | 0.0 | 4.308 | 6.462 | 9.231 |
| 03 | 0.0 | 5.231 | 12.0 | 2.769 |
| 04 | 1.846 | 8.0 | 9.231 | 0.923 |
| 05 | 0.0 | 0.615 | 0.0 | 19.385 |
| 06 | 0.0 | 0.923 | 19.077 | 0.0 |
| 07 | 18.462 | 0.923 | 0.0 | 0.615 |
| 08 | 0.0 | 20.0 | 0.0 | 0.0 |
| 09 | 0.0 | 0.0 | 20.0 | 0.0 |
| 10 | 0.0 | 0.0 | 0.0 | 20.0 |
| 11 | 0.0 | 1.846 | 18.154 | 0.0 |
| 12 | 1.846 | 0.0 | 18.154 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.258 | -0.258 | 0.772 | -1.235 |
| 02 | -2.038 | -0.128 | 0.227 | 0.552 |
| 03 | -2.038 | 0.039 | 0.796 | -0.491 |
| 04 | -0.795 | 0.42 | 0.552 | -1.235 |
| 05 | -2.038 | -1.438 | -2.038 | 1.253 |
| 06 | -2.038 | -1.235 | 1.238 | -2.038 |
| 07 | 1.206 | -1.235 | -2.038 | -1.438 |
| 08 | -2.038 | 1.283 | -2.038 | -2.038 |
| 09 | -2.038 | -2.038 | 1.283 | -2.038 |
| 10 | -2.038 | -2.038 | -2.038 | 1.283 |
| 11 | -2.038 | -0.795 | 1.19 | -2.038 |
| 12 | -0.795 | -2.038 | 1.19 | -2.038 |