Model info
| Transcription factor | ATF7 (GeneCards) | ||||||||
| Model | ATF7_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRTGACGTCAT | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 13767 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | ATF-2-like factors {1.1.1.3} | ||||||||
| HGNC | HGNC:792 | ||||||||
| EntrezGene | GeneID:11016 (SSTAR profile) | ||||||||
| UniProt ID | ATF7_HUMAN | ||||||||
| UniProt AC | P17544 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ATF7 expression | ||||||||
| ReMap ChIP-seq dataset list | ATF7 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2748.25 | 1104.25 | 5652.25 | 3139.25 |
| 02 | 7218.25 | 54.25 | 5291.25 | 80.25 |
| 03 | 6.5 | 7.5 | 55.5 | 12574.5 |
| 04 | 5.0 | 4.0 | 12467.0 | 168.0 |
| 05 | 12585.0 | 1.0 | 57.0 | 1.0 |
| 06 | 1.0 | 12543.0 | 70.0 | 30.0 |
| 07 | 7.0 | 0.0 | 12637.0 | 0.0 |
| 08 | 1.0 | 0.0 | 42.0 | 12601.0 |
| 09 | 2347.5 | 10270.5 | 17.5 | 8.5 |
| 10 | 12613.0 | 4.0 | 20.0 | 7.0 |
| 11 | 64.0 | 595.0 | 346.0 | 11639.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.14 | -1.05 | 0.581 | -0.007 |
| 02 | 0.825 | -4.023 | 0.515 | -3.645 |
| 03 | -5.878 | -5.771 | -4.001 | 1.38 |
| 04 | -6.063 | -6.209 | 1.372 | -2.921 |
| 05 | 1.381 | -6.847 | -3.976 | -6.847 |
| 06 | -6.847 | 1.378 | -3.778 | -4.582 |
| 07 | -5.823 | -7.2 | 1.385 | -7.2 |
| 08 | -6.847 | -7.2 | -4.267 | 1.382 |
| 09 | -0.297 | 1.178 | -5.071 | -5.674 |
| 10 | 1.383 | -6.209 | -4.952 | -5.823 |
| 11 | -3.864 | -1.667 | -2.206 | 1.303 |