We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBACH1
(GeneCards)
ModelBACH1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length13
Quality
A
Motif rank
0
ConsensusYGCTGAGTCMbbb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words502
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
HGNCHGNC:935
EntrezGeneGeneID:571
(SSTAR profile)
UniProt IDBACH1_HUMAN
UniProt ACO14867
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.3833599999999997
0.0005 4.45656
0.0001 6.678415
GTEx tissue expression atlas BACH1 expression
ReMap ChIP-seq dataset list BACH1 datasets
Motifs in JASPAR
PCM
ACGT
0131.40784.08348.757335.753
024.57933.194461.2350.991
0310.434483.8351.9633.769
0418.08839.77540.053402.085
051.92530.659445.50821.908
06401.46610.28762.24925.999
076.632107.429381.6634.276
083.118.06872.928405.903
098.097471.91517.1372.851
10393.19447.90341.2117.692
114.89167.139128.303199.667
1275.804132.779197.36194.056
1352.618189.295186.31371.775
PWM
ACGT
01-1.345-0.391-0.9220.98
02-3.027-1.2931.297-3.907
03-2.3571.344-3.583-3.169
04-1.863-1.119-1.1121.16
05-3.594-1.3681.262-1.685
061.158-2.369-0.685-1.525
07-2.738-0.1491.108-3.078
08-3.303-1.864-0.531.169
09-2.5741.319-1.913-3.358
101.138-0.94-1.085-1.883
11-2.9780.2870.0260.464
12-0.4920.060.452-0.28
13-0.8490.4110.395-0.546