BACH1_HUMAN.H11MO.0.A motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

BACH1
(GeneCards)

Model

BACH1_HUMAN.H11MO.0.A

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv10

Model length

13

Quality

A

Motif rank

0

Consensus

YGCTGAGTCMbbb

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

502

TF family

Jun-related factors {1.1.1}

TF subfamily

NF-E2-like factors {1.1.1.2}

HGNC

EntrezGene

GeneID:571
(SSTAR profile)

UniProt ID

UniProt AC

O14867
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	3.3833599999999997
0.0005	4.45656
0.0001	6.678415

GTEx tissue expression atlas

BACH1 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0591.1 (Bach1::Mafk; Mus musculus)

PCM

	A	C	G	T
01	31.407	84.083	48.757	335.753
02	4.579	33.194	461.235	0.991
03	10.434	483.835	1.963	3.769
04	18.088	39.775	40.053	402.085
05	1.925	30.659	445.508	21.908
06	401.466	10.287	62.249	25.999
07	6.632	107.429	381.663	4.276
08	3.1	18.068	72.928	405.903
09	8.097	471.915	17.137	2.851
10	393.194	47.903	41.21	17.692
11	4.89	167.139	128.303	199.667
12	75.804	132.779	197.361	94.056
13	52.618	189.295	186.313	71.775

PWM

	A	C	G	T
01	-1.345	-0.391	-0.922	0.98
02	-3.027	-1.293	1.297	-3.907
03	-2.357	1.344	-3.583	-3.169
04	-1.863	-1.119	-1.112	1.16
05	-3.594	-1.368	1.262	-1.685
06	1.158	-2.369	-0.685	-1.525
07	-2.738	-0.149	1.108	-3.078
08	-3.303	-1.864	-0.53	1.169
09	-2.574	1.319	-1.913	-3.358
10	1.138	-0.94	-1.085	-1.883
11	-2.978	0.287	0.026	0.464
12	-0.492	0.06	0.452	-0.28
13	-0.849	0.411	0.395	-0.546