BACH1_MOUSE.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

Check the newest release v12

Model info

Transcription factor

Model

BACH1_MOUSE.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

14

Quality

C

Motif rank

0

Consensus

YGCTGAGTCAYGST

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

8

TF family

Jun-related factors {1.1.1}

TF subfamily

NF-E2-like factors {1.1.1.2}

MGI

EntrezGene

GeneID:12013
(SSTAR profile)

UniProt ID

UniProt AC

P97302
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	4.346550000000001
0.0005	5.257709999999999
0.0001	7.103009999999999

GTEx tissue expression atlas

Bach1 expression

Motifs in JASPAR

MA0591.1 (Bach1::Mafk; Mus musculus)

PCM

	A	C	G	T
01	1.096	1.973	0.0	4.932
02	0.877	0.0	7.123	0.0
03	0.0	8.0	0.0	0.0
04	0.0	0.877	0.0	7.123
05	0.0	0.0	8.0	0.0
06	7.123	0.0	0.0	0.877
07	0.0	1.973	6.027	0.0
08	0.0	0.0	0.0	8.0
09	0.0	8.0	0.0	0.0
10	8.0	0.0	0.0	0.0
11	1.096	3.068	0.0	3.836
12	0.877	0.0	6.027	1.096
13	0.0	2.082	5.041	0.877
14	0.0	0.0	0.0	8.0

PWM

	A	C	G	T
01	-0.444	-0.011	-1.578	0.772
02	-0.59	-1.578	1.11	-1.578
03	-1.578	1.218	-1.578	-1.578
04	-1.578	-0.59	-1.578	1.11
05	-1.578	-1.578	1.218	-1.578
06	1.11	-1.578	-1.578	-0.59
07	-1.578	-0.011	0.955	-1.578
08	-1.578	-1.578	-1.578	1.218
09	-1.578	1.218	-1.578	-1.578
10	1.218	-1.578	-1.578	-1.578
11	-0.444	0.353	-1.578	0.547
12	-0.59	-1.578	0.955	-0.444
13	-1.578	0.032	0.792	-0.59
14	-1.578	-1.578	-1.578	1.218