Transcription factor | BACH2 (GeneCards) | ||||||||
Model | BACH2_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dhnWGCTGASTCAb | ||||||||
Best auROC (human) | 0.938 | ||||||||
Best auROC (mouse) | 0.988 | ||||||||
Peak sets in benchmark (human) | 10 | ||||||||
Peak sets in benchmark (mouse) | 3 | ||||||||
Aligned words | 506 | ||||||||
TF family | Jun-related factors {1.1.1} | ||||||||
TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
HGNC | HGNC:14078 | ||||||||
EntrezGene | GeneID:60468 (SSTAR profile) | ||||||||
UniProt ID | BACH2_HUMAN | ||||||||
UniProt AC | Q9BYV9 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | BACH2 expression | ||||||||
ReMap ChIP-seq dataset list | BACH2 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 141.0 | 28.0 | 24.0 | 45.0 | 20.0 | 3.0 | 8.0 | 27.0 | 26.0 | 14.0 | 16.0 | 19.0 | 19.0 | 20.0 | 15.0 | 75.0 |
02 | 69.0 | 47.0 | 47.0 | 43.0 | 13.0 | 24.0 | 2.0 | 26.0 | 18.0 | 15.0 | 14.0 | 16.0 | 11.0 | 56.0 | 25.0 | 74.0 |
03 | 21.0 | 13.0 | 7.0 | 70.0 | 21.0 | 7.0 | 7.0 | 107.0 | 12.0 | 17.0 | 7.0 | 52.0 | 15.0 | 17.0 | 4.0 | 123.0 |
04 | 0.0 | 11.0 | 52.0 | 6.0 | 2.0 | 8.0 | 43.0 | 1.0 | 1.0 | 5.0 | 17.0 | 2.0 | 7.0 | 7.0 | 332.0 | 6.0 |
05 | 0.0 | 8.0 | 1.0 | 1.0 | 5.0 | 24.0 | 0.0 | 2.0 | 28.0 | 406.0 | 4.0 | 6.0 | 1.0 | 12.0 | 0.0 | 2.0 |
06 | 0.0 | 3.0 | 1.0 | 30.0 | 28.0 | 22.0 | 2.0 | 398.0 | 1.0 | 0.0 | 0.0 | 4.0 | 2.0 | 1.0 | 0.0 | 8.0 |
07 | 6.0 | 11.0 | 12.0 | 2.0 | 6.0 | 3.0 | 10.0 | 7.0 | 0.0 | 0.0 | 2.0 | 1.0 | 9.0 | 8.0 | 383.0 | 40.0 |
08 | 12.0 | 4.0 | 1.0 | 4.0 | 14.0 | 2.0 | 1.0 | 5.0 | 356.0 | 6.0 | 7.0 | 38.0 | 30.0 | 2.0 | 9.0 | 9.0 |
09 | 29.0 | 79.0 | 284.0 | 20.0 | 1.0 | 0.0 | 13.0 | 0.0 | 3.0 | 2.0 | 13.0 | 0.0 | 2.0 | 7.0 | 42.0 | 5.0 |
10 | 0.0 | 0.0 | 0.0 | 35.0 | 3.0 | 0.0 | 0.0 | 85.0 | 0.0 | 6.0 | 3.0 | 343.0 | 0.0 | 0.0 | 0.0 | 25.0 |
11 | 1.0 | 1.0 | 1.0 | 0.0 | 2.0 | 4.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 38.0 | 445.0 | 3.0 | 2.0 |
12 | 41.0 | 0.0 | 0.0 | 0.0 | 440.0 | 9.0 | 3.0 | 1.0 | 1.0 | 2.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 |
13 | 26.0 | 139.0 | 98.0 | 220.0 | 4.0 | 1.0 | 2.0 | 4.0 | 0.0 | 1.0 | 1.0 | 2.0 | 1.0 | 0.0 | 1.0 | 0.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 1.497 | -0.108 | -0.26 | 0.361 | -0.439 | -2.234 | -1.328 | -0.144 | -0.181 | -0.788 | -0.658 | -0.49 | -0.49 | -0.439 | -0.721 | 0.868 |
02 | 0.785 | 0.404 | 0.404 | 0.316 | -0.86 | -0.26 | -2.584 | -0.181 | -0.543 | -0.721 | -0.788 | -0.658 | -1.022 | 0.578 | -0.22 | 0.855 |
03 | -0.392 | -0.86 | -1.454 | 0.8 | -0.392 | -1.454 | -1.454 | 1.222 | -0.938 | -0.599 | -1.454 | 0.504 | -0.721 | -0.599 | -1.975 | 1.361 |
04 | -4.4 | -1.022 | 0.504 | -1.6 | -2.584 | -1.328 | 0.316 | -3.126 | -3.126 | -1.77 | -0.599 | -2.584 | -1.454 | -1.454 | 2.352 | -1.6 |
05 | -4.4 | -1.328 | -3.126 | -3.126 | -1.77 | -0.26 | -4.4 | -2.584 | -0.108 | 2.553 | -1.975 | -1.6 | -3.126 | -0.938 | -4.4 | -2.584 |
06 | -4.4 | -2.234 | -3.126 | -0.04 | -0.108 | -0.346 | -2.584 | 2.533 | -3.126 | -4.4 | -4.4 | -1.975 | -2.584 | -3.126 | -4.4 | -1.328 |
07 | -1.6 | -1.022 | -0.938 | -2.584 | -1.6 | -2.234 | -1.114 | -1.454 | -4.4 | -4.4 | -2.584 | -3.126 | -1.215 | -1.328 | 2.495 | 0.244 |
08 | -0.938 | -1.975 | -3.126 | -1.975 | -0.788 | -2.584 | -3.126 | -1.77 | 2.422 | -1.6 | -1.454 | 0.193 | -0.04 | -2.584 | -1.215 | -1.215 |
09 | -0.074 | 0.92 | 2.196 | -0.439 | -3.126 | -4.4 | -0.86 | -4.4 | -2.234 | -2.584 | -0.86 | -4.4 | -2.584 | -1.454 | 0.293 | -1.77 |
10 | -4.4 | -4.4 | -4.4 | 0.112 | -2.234 | -4.4 | -4.4 | 0.993 | -4.4 | -1.6 | -2.234 | 2.384 | -4.4 | -4.4 | -4.4 | -0.22 |
11 | -3.126 | -3.126 | -3.126 | -4.4 | -2.584 | -1.975 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | -4.4 | 0.193 | 2.645 | -2.234 | -2.584 |
12 | 0.269 | -4.4 | -4.4 | -4.4 | 2.633 | -1.215 | -2.234 | -3.126 | -3.126 | -2.584 | -3.126 | -4.4 | -3.126 | -4.4 | -4.4 | -3.126 |
13 | -0.181 | 1.483 | 1.135 | 1.941 | -1.975 | -3.126 | -2.584 | -1.975 | -4.4 | -3.126 | -3.126 | -2.584 | -3.126 | -4.4 | -3.126 | -4.4 |