Model info
| Transcription factor | BACH2 (GeneCards) | ||||||||
| Model | BACH2_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WGCTKWSTCAb | ||||||||
| Best auROC (human) | 0.926 | ||||||||
| Best auROC (mouse) | 0.98 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
| HGNC | HGNC:14078 | ||||||||
| EntrezGene | GeneID:60468 (SSTAR profile) | ||||||||
| UniProt ID | BACH2_HUMAN | ||||||||
| UniProt AC | Q9BYV9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BACH2 expression | ||||||||
| ReMap ChIP-seq dataset list | BACH2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 61.0 | 48.0 | 34.0 | 357.0 |
| 02 | 7.0 | 39.0 | 447.0 | 7.0 |
| 03 | 22.0 | 462.0 | 6.0 | 10.0 |
| 04 | 39.0 | 19.0 | 4.0 | 438.0 |
| 05 | 29.0 | 30.0 | 397.0 | 44.0 |
| 06 | 379.0 | 19.0 | 28.0 | 74.0 |
| 07 | 22.0 | 112.0 | 335.0 | 31.0 |
| 08 | 5.0 | 8.0 | 4.0 | 483.0 |
| 09 | 30.0 | 460.0 | 8.0 | 2.0 |
| 10 | 482.0 | 6.0 | 4.0 | 8.0 |
| 11 | 28.0 | 160.0 | 106.0 | 206.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.705 | -0.938 | -1.27 | 1.041 |
| 02 | -2.694 | -1.138 | 1.265 | -2.694 |
| 03 | -1.681 | 1.298 | -2.819 | -2.394 |
| 04 | -1.138 | -1.818 | -3.126 | 1.245 |
| 05 | -1.421 | -1.389 | 1.147 | -1.022 |
| 06 | 1.101 | -1.818 | -1.454 | -0.516 |
| 07 | -1.681 | -0.108 | 0.978 | -1.358 |
| 08 | -2.961 | -2.584 | -3.126 | 1.343 |
| 09 | -1.389 | 1.294 | -2.584 | -3.573 |
| 10 | 1.34 | -2.819 | -3.126 | -2.584 |
| 11 | -1.454 | 0.244 | -0.163 | 0.495 |