We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBach2
ModelBACH2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnhSCYKAGTCAYn
Best auROC (human)0.93
Best auROC (mouse)0.991
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)3
Aligned words504
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
MGIMGI:894679
EntrezGeneGeneID:12014
(SSTAR profile)
UniProt IDBACH2_MOUSE
UniProt ACP97303
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.265910000000002
0.0005 10.30004
0.0001 14.513345
GTEx tissue expression atlas Bach2 expression
Motifs in JASPAR
MA1101.1 (BACH2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0133.018.025.044.023.027.05.0101.014.019.015.055.016.024.025.056.0
027.03.070.06.014.016.044.014.05.020.036.09.07.016.0225.08.0
032.027.03.01.09.045.01.00.018.0334.09.014.01.027.07.02.0
040.03.01.026.033.042.013.0345.00.04.00.016.03.02.02.010.0
057.015.014.00.013.07.020.011.00.05.09.02.09.016.0339.033.0
0621.02.00.06.034.02.00.07.0335.010.01.036.039.00.01.06.0
074.056.0366.03.03.01.010.00.00.00.02.00.00.02.053.00.0
080.00.00.07.04.00.00.055.04.06.00.0421.00.00.00.03.0
090.08.00.00.01.05.00.00.00.00.00.00.012.0473.01.00.0
1011.00.00.02.0480.01.00.05.00.00.01.00.00.00.00.00.0
118.0185.075.0223.00.00.01.00.00.00.00.01.03.00.01.03.0
124.01.05.01.048.050.032.055.011.032.025.09.018.067.0105.037.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.054-0.543-0.220.339-0.302-0.144-1.771.165-0.788-0.49-0.7210.56-0.658-0.26-0.220.578
02-1.454-2.2340.8-1.6-0.788-0.6580.339-0.788-1.77-0.4390.14-1.215-1.454-0.6581.963-1.328
03-2.584-0.144-2.234-3.126-1.2150.361-3.126-4.4-0.5432.358-1.215-0.788-3.126-0.144-1.454-2.584
04-4.4-2.234-3.126-0.1810.0540.293-0.862.39-4.4-1.975-4.4-0.658-2.234-2.584-2.584-1.114
05-1.454-0.721-0.788-4.4-0.86-1.454-0.439-1.022-4.4-1.77-1.215-2.584-1.215-0.6582.3730.054
06-0.392-2.584-4.4-1.60.083-2.584-4.4-1.4542.361-1.114-3.1260.140.219-4.4-3.126-1.6
07-1.9750.5782.449-2.234-2.234-3.126-1.114-4.4-4.4-4.4-2.584-4.4-4.4-2.5840.523-4.4
08-4.4-4.4-4.4-1.454-1.975-4.4-4.40.56-1.975-1.6-4.42.589-4.4-4.4-4.4-2.234
09-4.4-1.328-4.4-4.4-3.126-1.77-4.4-4.4-4.4-4.4-4.4-4.4-0.9382.706-3.126-4.4
10-1.022-4.4-4.4-2.5842.72-3.126-4.4-1.77-4.4-4.4-3.126-4.4-4.4-4.4-4.4-4.4
11-1.3281.7680.8681.955-4.4-4.4-3.126-4.4-4.4-4.4-4.4-3.126-2.234-4.4-3.126-2.234
12-1.975-3.126-1.77-3.1260.4250.4650.0230.56-1.0220.023-0.22-1.215-0.5430.7561.2030.167